Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 IPO8P1-201ENST00000455509 3109 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 RPL6P5-201ENST00000445678 828 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 RPL7P15-201ENST00000461190 712 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 SCARNA14-201ENST00000516903 136 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 NPM1P47-201ENST00000560843 856 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 MIR5685-201ENST00000579080 79 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AC103858.2-201ENST00000621471 543 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AL359715.5-201ENST00000623431 443 ntBASIC3.71□□□□□ -1.82
CCDC88CQ9P219 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC88CQ9P219 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 FAM35DP-201ENST00000323387 2712 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 SNORD35B-201ENST00000363660 87 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 RNA5SP513-201ENST00000364648 118 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC007389.2-201ENST00000434630 306 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 CCDC75P1-201ENST00000469247 791 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 MIR2116-201ENST00000517221 80 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC026403.1-201ENST00000518938 295 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 RPL23AP87-202ENST00000573039 466 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC006971.1-201ENST00000407916 4486 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 SNORA70.4-201ENST00000365509 134 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 SNORA3.3-201ENST00000408712 125 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 OR9M1P-201ENST00000459641 921 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 GAPDHP36-201ENST00000480688 918 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 VN1R105P-201ENST00000486595 910 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC008802.1-201ENST00000519121 791 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 NDUFA5P2-201ENST00000519723 344 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC244505.7-201ENST00000599675 272 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 SNX6P1-201ENST00000601728 1224 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC88CQ9P219 AC132825.8-201ENST00000640783 297 ntBASIC3.7□□□□□ -1.82
CCDC88CQ9P219 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 MIR1251-201ENST00000408552 70 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 PGBD4P8-201ENST00000412993 562 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 KCTD9P3-201ENST00000434597 1169 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 RPL5P32-201ENST00000454085 879 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC018635.1-201ENST00000468292 1030 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 HNRNPKP5-201ENST00000515300 253 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC007599.1-201ENST00000568688 1174 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms