Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC015722.2-201ENST00000622210 551 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 AC112198.2-201ENST00000426589 6996 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 SNORA48.2-201ENST00000390926 124 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 DBIP2-201ENST00000419076 262 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 IGKV2-38-201ENST00000517443 247 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 AC008011.1-201ENST00000545989 227 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 AC069240.1-201ENST00000548774 375 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 AL591424.2-201ENST00000617023 128 ntBASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PHRF1Q9P1Y6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 MIR128-1-201ENST00000384921 82 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 DPY19L1P2-201ENST00000426647 915 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC005326.1-201ENST00000429197 123 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 SETD6P1-201ENST00000444575 317 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AC006960.3-201ENST00000561845 705 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 LSM1P2-201ENST00000604911 322 ntBASIC5.05□□□□□ -1.6
PHRF1Q9P1Y6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 MAPK10-253ENST00000641010 4072 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 RNU6-1279P-201ENST00000383917 103 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 AL391219.1-201ENST00000422570 483 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 NPM1P25-201ENST00000429734 854 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 RN7SL585P-201ENST00000470538 280 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 PPBPP1-201ENST00000510807 373 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 GNRHR2P1-201ENST00000555315 631 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 AL390816.3-201ENST00000604527 1066 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 SNORA62.6-201ENST00000606322 83 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 MIR8057-201ENST00000620957 69 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 AP000553.6-201ENST00000641242 118 ntBASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHRF1Q9P1Y6 UBE3AP2-201ENST00000429033 2259 ntBASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 AC097504.1-201ENST00000515103 2415 ntBASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.03□□□□□ -1.6
PHRF1Q9P1Y6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms