Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM55Q9BYV6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 TEX21P-201ENST00000447107 1476 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 GVINP1-202ENST00000531871 7271 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 OR10R3P-201ENST00000361688 942 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 SNORA17A-201ENST00000391185 133 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 U3.28-201ENST00000391249 210 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 DHFRP6-201ENST00000401776 268 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 RPL21P32-201ENST00000419877 477 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AL353597.2-202ENST00000434901 373 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 GEMIN8P3-201ENST00000445417 720 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ARPC3P5-201ENST00000448802 534 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 APOOP2-201ENST00000461561 539 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC104763.1-201ENST00000475274 360 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC017015.1-201ENST00000477387 286 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 RN7SL214P-201ENST00000487317 265 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 SNORD46.2-201ENST00000516021 102 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AP004247.1-201ENST00000531556 1289 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC013828.2-201ENST00000532487 235 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC107304.1-201ENST00000604229 296 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC112187.2-201ENST00000604345 283 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AC027807.2-201ENST00000616099 408 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 SNORA17.5-201ENST00000630429 132 ntBASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM55Q9BYV6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 MTCO1P11-201ENST00000429111 1528 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 RNA5SP477-201ENST00000362639 119 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 U8.14-201ENST00000390843 143 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AC016769.3-201ENST00000396562 315 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 RNU2-21P-201ENST00000410368 188 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 RN7SKP56-201ENST00000410513 331 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 RN7SKP144-201ENST00000411108 279 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM55Q9BYV6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms