Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PSMC1P13-201ENST00000458195 985 ntBASIC5.83□□□□□ -1.48
SCAPERQ9BY12 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SCAPERQ9BY12 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 SOD2P1-201ENST00000396543 562 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 CYCSP4-201ENST00000429682 331 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 RPL5P24-201ENST00000463742 885 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC020914.6-201ENST00000594327 272 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC067945.1-201ENST00000342609 618 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 VN1R8P-201ENST00000407739 893 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 BOLA3P4-201ENST00000418151 400 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC092641.1-201ENST00000440229 772 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC022695.1-201ENST00000522089 237 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC124312.6-202ENST00000623624 418 ntBASIC5.82□□□□□ -1.48
SCAPERQ9BY12 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCAPERQ9BY12 AC020633.1-201ENST00000468439 2247 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 MARK2P15-201ENST00000432204 2186 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 SNORA48.2-201ENST00000390926 124 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 RPS23P10-201ENST00000416185 486 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AL390879.2-203ENST00000426943 1121 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 RPL21P6-201ENST00000479171 504 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC098799.1-201ENST00000504752 800 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC084759.1-201ENST00000561168 290 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AC023509.5-201ENST00000617434 807 ntBASIC5.81□□□□□ -1.48
SCAPERQ9BY12 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCAPERQ9BY12 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 Z95327.2-201ENST00000414579 1873 ntBASIC5.8□□□□□ -1.48
SCAPERQ9BY12 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AC073335.1-201ENST00000427776 363 ntBASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 RANP8-201ENST00000444720 713 ntBASIC5.8□□□□□ -1.48
SCAPERQ9BY12 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SCAPERQ9BY12 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 RPL7AP73-201ENST00000413490 353 ntBASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.79□□□□□ -1.48
SCAPERQ9BY12 AC073587.1-201ENST00000447093 876 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms