Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 SGO1P1-201ENST00000603525 1447 ntBASIC5.54□□□□□ -1.52
SALL3Q9BXA9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SALL3Q9BXA9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 HSPD1P11-201ENST00000508643 1702 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 OR13C3-201ENST00000374781 1108 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RNU6-796P-201ENST00000391086 107 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL121978.1-201ENST00000402778 359 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RNU4-72P-201ENST00000410754 173 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 SNORA74C-2-201ENST00000411179 201 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RAB28P1-201ENST00000411517 641 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 BTF3L4P1-201ENST00000413813 468 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL590139.1-201ENST00000416267 400 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RPEP3-201ENST00000425462 676 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC118469.1-201ENST00000442943 488 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 BUD31P2-201ENST00000449374 300 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC008280.2-201ENST00000455473 307 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC079203.1-201ENST00000487972 404 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 SUMO1P1-201ENST00000497904 306 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 OR51K1P-201ENST00000510214 950 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AP000827.1-201ENST00000527814 258 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL358913.1-201ENST00000554342 121 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 SETP1-201ENST00000556014 845 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RPL21P7-201ENST00000557463 483 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC074050.1-201ENST00000563247 211 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 ATP5J2P6-201ENST00000565203 266 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC008782.1-201ENST00000603386 430 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC007349.4-201ENST00000608114 532 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL353600.1-201ENST00000608148 251 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AL133243.1-201ENST00000614487 366 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 MTND4P26-201ENST00000415971 1359 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC096656.1-201ENST00000623826 1364 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AP001273.1-201ENST00000624493 3152 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 AC139769.1-204ENST00000472297 1931 ntBASIC5.53□□□□□ -1.52
SALL3Q9BXA9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.53□□□□□ -1.52
SALL3Q9BXA9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 SNORD113-6-201ENST00000363345 75 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RNU6-1263P-201ENST00000384601 106 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RNU6-1242P-201ENST00000391052 103 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 MIR298-201ENST00000401212 88 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 FABP12P1-201ENST00000401911 322 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 SFR1P1-201ENST00000403720 688 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 VDAC1P9-201ENST00000412766 841 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 TIMM9P2-201ENST00000419324 266 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RPEP2-201ENST00000432149 701 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC006466.1-201ENST00000438721 289 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AC000041.1-201ENST00000439655 175 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 EXTL2P1-201ENST00000446218 416 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RPS6P2-201ENST00000454208 705 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 MTCO2P18-201ENST00000457151 658 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 USP9YP25-201ENST00000457708 443 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 OR52A4P-201ENST00000472867 958 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 RPS3AP43-201ENST00000479743 781 ntBASIC5.52□□□□□ -1.53
SALL3Q9BXA9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.52□□□□□ -1.53
SALL3Q9BXA9 MTCO3P7-201ENST00000510008 774 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms