Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC017104.5-201ENST00000637647 639 ntBASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 OR8A1-204ENST00000642111 1145 ntBASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 ASNSP1-204ENST00000641977 1664 ntBASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NSMCE2Q96MF7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC103591.2-201ENST00000265259 766 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AL512646.1-201ENST00000269395 1077 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC021146.4-201ENST00000309229 279 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 RNU6-1339P-201ENST00000363574 91 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 SNORD56.4-201ENST00000363883 71 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 JKAMPP1-201ENST00000413804 919 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 MTATP6P11-201ENST00000428071 670 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC074367.1-201ENST00000438685 1125 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 UBE2V1P5-201ENST00000440070 405 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 RPL23AP93-201ENST00000440847 484 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 RN7SL585P-201ENST00000470538 280 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 RPS6P4-201ENST00000494693 758 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC104109.1-201ENST00000498563 436 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 MTND4LP2-201ENST00000502312 285 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC139783.2-201ENST00000504847 1145 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC008033.2-201ENST00000542626 177 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC018926.3-201ENST00000618841 406 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 MIR4727-201ENST00000622232 55 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC01808-202ENST00000641680 1116 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC025125.1-201ENST00000624743 1922 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC125257.1-201ENST00000560400 2930 ntBASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NSMCE2Q96MF7 AC046144.1-201ENST00000478559 1853 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RNA5SP191-201ENST00000362585 102 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 MIR124-3-201ENST00000384866 87 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RPL23AP59-201ENST00000399415 461 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AL391361.1-201ENST00000405580 489 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RNU2-21P-201ENST00000410368 188 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RNA5SP39-201ENST00000411245 120 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 BX510359.2-201ENST00000417920 305 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RBMY1KP-201ENST00000423480 476 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AL049745.1-201ENST00000433953 286 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 FABP5P3-201ENST00000437960 408 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RPL23AP43-201ENST00000446445 471 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 AC104306.1-201ENST00000449702 371 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 DNAJC19P8-201ENST00000452887 259 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RPS27AP17-201ENST00000463344 455 ntBASIC4.13□□□□□ -1.75
NSMCE2Q96MF7 RPL23AP2-201ENST00000471227 466 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms