Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC093755.1-201ENST00000512950 1023 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RN7SKP66-201ENST00000516681 231 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC012400.1-201ENST00000518452 381 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC010306.1-201ENST00000523223 1117 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AP000676.2-201ENST00000529711 301 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 MIR4666A-201ENST00000580160 79 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC146944.4-201ENST00000602697 718 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC087283.1-201ENST00000604029 1074 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC133552.5-201ENST00000604266 540 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC009597.2-201ENST00000604659 592 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 TAS2R6P-201ENST00000605022 826 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 MIR7973-1-201ENST00000614683 76 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC090527.3-201ENST00000619041 548 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC015726.3-201ENST00000624501 418 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC007671.2-201ENST00000637344 619 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AL592182.3-201ENST00000642132 3304 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 Z98755.1-201ENST00000407015 1384 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 ASNSP1-201ENST00000518311 1939 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 FAM3C2-201ENST00000312214 681 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 RN7SKP153-201ENST00000365026 316 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 AL645733.1-201ENST00000402250 217 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AL593851.1-201ENST00000426171 157 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 HNRNPA3P4-201ENST00000427514 803 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC124944.2-201ENST00000429866 1242 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC092013.1-201ENST00000438795 332 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 PTMAP6-201ENST00000439110 327 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 ELOCP10-201ENST00000440624 327 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 MTND5P2-201ENST00000442927 1142 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 HMGB1P16-201ENST00000447155 540 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 ANKRD26P4-201ENST00000455755 950 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 RNU7-125P-201ENST00000458760 62 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 RPL7AP6-201ENST00000477943 801 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC073358.1-201ENST00000505671 684 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 RNU6-941P-201ENST00000516346 108 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 RN7SKP260-201ENST00000516907 149 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5□□□□□ -1.61
VPS50Q96JG6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC068714.1-201ENST00000559623 800 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5□□□□□ -1.61
VPS50Q96JG6 RPL10P14-201ENST00000565265 298 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 VN1R88P-201ENST00000596787 292 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 ELOCP34-201ENST00000604436 327 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
VPS50Q96JG6 AL139418.1-201ENST00000613613 177 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AL392048.1-201ENST00000613946 534 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5□□□□□ -1.61
VPS50Q96JG6 AC009090.3-201ENST00000616553 565 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC099494.2-201ENST00000623371 978 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AP002799.1-201ENST00000623552 423 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AP000648.2-201ENST00000624182 404 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC092608.3-201ENST00000625017 386 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 ATE1-AS1-202ENST00000636460 506 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 AC135068.12-201ENST00000637370 931 ntBASIC5□□□□□ -1.61
VPS50Q96JG6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS50Q96JG6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VPS50Q96JG6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms