Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MTND3P5-201ENST00000512798 333 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 MTCYBP20-201ENST00000524239 1129 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 OR10G5P-201ENST00000532733 358 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 RN7SKP299-201ENST00000606679 301 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC013562.2-201ENST00000611632 603 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL158063.1-201ENST00000615349 536 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AC073348.1-201ENST00000623002 331 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AL359715.5-201ENST00000623431 443 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 AP002505.2-201ENST00000623585 696 ntBASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTHRC1Q96CG8 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 SAMMSON-213ENST00000641336 1521 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RNU6-249P-201ENST00000363016 102 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RNU6-492P-201ENST00000363035 104 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 U8.4-201ENST00000363626 134 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 U3.36-201ENST00000408418 213 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RN7SKP126-201ENST00000411143 300 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 COX6CP13-201ENST00000428703 226 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 USP9YP28-201ENST00000435142 589 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RPL7AP61-201ENST00000443410 636 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AL591363.1-201ENST00000450091 483 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC092647.2-201ENST00000452998 253 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 DDX39BP2-208ENST00000453923 258 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 MTCO3P16-201ENST00000454456 754 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RPL5P22-201ENST00000480199 884 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RN7SL441P-201ENST00000492388 296 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC104685.1-201ENST00000502445 371 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC011352.3-201ENST00000505162 593 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 MTND4P2-201ENST00000507767 1203 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RN7SKP31-201ENST00000516354 278 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RPL12P22-201ENST00000519073 490 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 HIGD1AP6-201ENST00000521833 279 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 OR5AK1P-201ENST00000524837 922 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC022832.1-201ENST00000530718 645 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC007115.1-201ENST00000546853 234 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC006270.3-201ENST00000605967 1036 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC211433.2-201ENST00000608433 387 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AC005962.2-201ENST00000611427 652 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 AL390237.1-201ENST00000404226 1415 ntBASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTHRC1Q96CG8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms