Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 Z95114.1-201ENST00000624264 14574 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 ZNF733P-202ENST00000444809 1573 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AP001157.1-201ENST00000550837 2339 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RNA5SP394-201ENST00000364216 119 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RNU1-59P-201ENST00000364829 162 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 Y_RNA.422-201ENST00000384054 114 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-1263P-201ENST00000384601 106 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 HMGB1P20-201ENST00000402555 677 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AL049693.1-201ENST00000402760 611 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MRPL53P1-201ENST00000414323 319 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 BX510359.3-201ENST00000422168 306 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 NUP35P1-201ENST00000422734 947 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC018630.2-202ENST00000422992 927 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 SDCBPP2-201ENST00000424643 885 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RABEPKP1-201ENST00000440529 1026 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 PGBD4P3-201ENST00000440731 581 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AL121877.1-201ENST00000453704 622 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 Z82190.1-201ENST00000454534 490 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 RANP1-206ENST00000455094 651 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC021660.1-201ENST00000465006 554 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 KCTD9P5-201ENST00000504141 1170 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 ATP5LP3-201ENST00000514223 304 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 CDC42P3-201ENST00000518493 633 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 TPM3P3-201ENST00000521343 354 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AP003122.4-201ENST00000530980 758 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC136618.2-201ENST00000575091 400 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MIR5697-201ENST00000578045 78 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MIR4489-201ENST00000578869 62 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 U1.25-201ENST00000614085 162 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 U1.34-201ENST00000618578 162 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 U1.31-201ENST00000620022 160 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 7SK.10-201ENST00000621414 298 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 AC116563.2-201ENST00000624751 535 ntBASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHKBP1Q8TBC3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC016583.1-201ENST00000624221 2431 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 CYP1D1P-201ENST00000416662 1433 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 NSRP1P1-201ENST00000444067 1693 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 SNORA64.1-201ENST00000362600 132 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 Y_RNA.97-201ENST00000363094 102 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 Y_RNA.145-201ENST00000363527 102 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 MIR143-201ENST00000385300 106 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL391361.1-201ENST00000405580 489 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-908P-201ENST00000410160 94 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RN7SKP59-201ENST00000410520 314 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 GAPDHP48-201ENST00000436626 961 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC002504.1-201ENST00000438281 691 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RPS26P30-201ENST00000443431 335 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 COX6CP18-201ENST00000448769 222 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 GAPDHP17-201ENST00000449858 1001 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms