Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR323B-201ENST00000385269 82 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL035419.1-201ENST00000397037 564 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ERHP2-201ENST00000402323 299 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 VTA1P1-201ENST00000414044 866 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 Z75741.2-201ENST00000417272 1167 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ARL4AP3-201ENST00000441452 574 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL035551.1-201ENST00000446931 348 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 MTND1P29-201ENST00000448112 647 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC233982.1-201ENST00000451247 436 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 NPM1P13-201ENST00000452663 865 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RPL23AP56-201ENST00000460778 453 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC005532.2-201ENST00000467154 373 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC091435.1-201ENST00000505442 584 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC091860.1-201ENST00000505723 432 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PRELID3BP4-201ENST00000515476 571 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RNU6-1129P-201ENST00000515964 104 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 snoZ278.1-201ENST00000517059 112 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 GSTP1P1-201ENST00000548078 319 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL049839.1-201ENST00000556151 657 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC022662.1-201ENST00000580252 331 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 SS18L2P2-201ENST00000583960 235 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 VN1R83P-201ENST00000595685 445 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 SUMO2P15-201ENST00000604285 278 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC121247.2-201ENST00000604776 136 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC091979.2-201ENST00000607514 214 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AP003392.5-201ENST00000607857 415 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL021707.7-201ENST00000607991 416 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC011472.4-201ENST00000615848 491 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC092140.2-201ENST00000618027 521 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC139769.3-201ENST00000618383 175 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 AC005261.4-201ENST00000600047 1385 ntBASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CLIP4Q8N3C7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 FAM133CP-201ENST00000332869 704 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 RNU6-185P-201ENST00000384421 107 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 SNORA70-201ENST00000384436 135 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 Z97832.1-201ENST00000402490 328 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 RN7SKP182-201ENST00000410772 298 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL160275.2-201ENST00000412010 394 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 TRGV6-201ENST00000417928 299 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 THAP5P1-201ENST00000439089 262 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 EEF1B2P5-201ENST00000444820 548 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 AC002553.2-201ENST00000453217 340 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 CDC42P1-201ENST00000456658 548 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 RN7SL558P-201ENST00000497468 299 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 RN7SKP66-201ENST00000516681 231 ntBASIC4.47□□□□□ -1.69
CLIP4Q8N3C7 RNU6-709P-201ENST00000517257 104 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms