Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ANAPC10P1-201ENST00000395991 556 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 BTF3P8-201ENST00000414577 526 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AL645608.4-201ENST00000423619 154 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 RPS17P2-201ENST00000461663 408 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC073522.1-201ENST00000483312 377 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 RPL21P131-201ENST00000497298 483 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 MIR5699-201ENST00000578903 90 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 MIR3138-201ENST00000585238 82 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 PART1_2.1-201ENST00000612397 250 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC018926.3-201ENST00000618841 406 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 RAD17P1-201ENST00000418130 2042 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 PCAT14-202ENST00000627127 3935 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 USP9YP4-201ENST00000424401 1745 ntBASIC5.17□□□□□ -1.58
HERC6Q8IVU3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HERC6Q8IVU3 AC104118.1-201ENST00000607625 1589 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ASNSP1-204ENST00000641977 1664 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RNU1-85P-201ENST00000364127 164 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RNU2-65P-201ENST00000410162 185 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 LINC00993-201ENST00000420453 540 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC092634.2-201ENST00000428146 1010 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AL353597.2-202ENST00000434901 373 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RRM2P4-201ENST00000441721 562 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC244505.3-201ENST00000454598 187 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 CYCSP34-201ENST00000458172 304 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RPL23AP24-201ENST00000458203 385 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC091860.1-201ENST00000505723 432 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 SMARCE1P4-201ENST00000523647 241 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 RN7SL652P-201ENST00000577769 300 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 AC022893.2-201ENST00000564832 3296 ntBASIC5.16□□□□□ -1.58
HERC6Q8IVU3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.16□□□□□ -1.58
HERC6Q8IVU3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HERC6Q8IVU3 AC100778.3-201ENST00000580060 1750 ntBASIC5.15□□□□□ -1.58
HERC6Q8IVU3 AL353743.4-201ENST00000422653 1547 ntBASIC5.15□□□□□ -1.58
HERC6Q8IVU3 SNORA73.1-201ENST00000363107 205 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 RNU6-224P-201ENST00000384055 107 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 MIR134-201ENST00000385258 73 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC025750.1-201ENST00000399891 379 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 RN7SKP267-201ENST00000410381 285 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AL591848.1-201ENST00000413092 322 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.15□□□□□ -1.59
HERC6Q8IVU3 MTATP6P20-201ENST00000414147 562 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.15□□□□□ -1.59
HERC6Q8IVU3 AC140479.3-201ENST00000418944 1126 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms