Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC093331.1-201ENST00000521474 169 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC105233.3-201ENST00000531125 744 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC025260.1-201ENST00000548858 430 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 MIR4512-201ENST00000583257 77 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC099778.2-201ENST00000610904 211 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AL450489.1-201ENST00000612071 468 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 MIR6780A-201ENST00000615089 68 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC090246.1-201ENST00000616499 426 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AL445528.2-201ENST00000620582 470 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 ZNF542P-204ENST00000482727 1305 ntBASIC3.6□□□□□ -1.83
CCDC58Q4VC31 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
CCDC58Q4VC31 AC092326.2-201ENST00000624772 1561 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RNA5SP167-201ENST00000365461 116 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 MIR184-201ENST00000384962 84 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RAB9AP5-201ENST00000437794 597 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RAB9AP2-201ENST00000443911 597 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AL500522.2-201ENST00000448562 343 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AL513533.1-201ENST00000453728 415 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC018638.3-201ENST00000461273 132 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RPL7P1-201ENST00000468161 747 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RPL7P9-201ENST00000468715 747 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 OR5M14P-201ENST00000506803 618 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC093824.1-201ENST00000508796 343 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 EIF1P6-201ENST00000600054 334 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AL451044.1-201ENST00000604867 238 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC090948.1-201ENST00000607464 549 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AL512624.1-201ENST00000613638 469 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 AC018445.2-201ENST00000622987 260 ntBASIC3.59□□□□□ -1.83
CCDC58Q4VC31 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC58Q4VC31 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.84
CCDC58Q4VC31 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.59□□□□□ -1.84
CCDC58Q4VC31 CR381670.1-201ENST00000624291 1693 ntBASIC3.59□□□□□ -1.84
CCDC58Q4VC31 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 SNORA60-201ENST00000362396 134 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 MIR129-1-201ENST00000384972 72 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC136624.1-201ENST00000400791 413 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RN7SKP229-201ENST00000410465 302 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 BX510359.3-201ENST00000422168 306 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC006065.1-201ENST00000422539 802 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 CHIAP3-201ENST00000423668 1133 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 USP9YP9-201ENST00000429406 715 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AL138799.3-201ENST00000438968 350 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RPL12P26-201ENST00000452430 487 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 OR52A4P-201ENST00000472867 958 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RNA5SP49-201ENST00000516450 115 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RNA5SP519-201ENST00000516480 119 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 RNU6-943P-201ENST00000516960 98 ntBASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC58Q4VC31 AC068714.1-201ENST00000559623 800 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms