Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.09□□□□□ -1.27
CTC1Q2NKJ3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
CTC1Q2NKJ3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RNU6-1115P-201ENST00000362490 106 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RNU6-1188P-201ENST00000363795 107 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RNU6-1109P-201ENST00000391187 107 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC093716.1-201ENST00000435923 377 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 FABP5P14-201ENST00000437273 393 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AL353093.1-201ENST00000441292 436 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 MTND6P5-201ENST00000448266 512 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RPL18AP17-201ENST00000455326 198 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC017015.1-201ENST00000477387 286 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 POU5F1P7-201ENST00000508759 541 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RNU6-138P-201ENST00000515952 107 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 RNU2-53P-201ENST00000516257 147 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 NARSP2-201ENST00000518524 679 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 MIR3133-201ENST00000583157 78 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AC006157.1-201ENST00000611750 366 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AL096712.1-201ENST00000614561 159 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AP004289.2-201ENST00000444413 1457 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 PNPT1P2-201ENST00000456768 2050 ntBASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.08□□□□□ -1.28
CTC1Q2NKJ3 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 WBP11P1-201ENST00000562560 1931 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RNU6-874P-201ENST00000362390 105 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 Y_RNA.60-201ENST00000362831 98 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RNA5SP240-201ENST00000365355 128 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 SNORD115.1-201ENST00000391109 76 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AL359694.1-201ENST00000403247 604 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RN7SKP229-201ENST00000410465 302 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC017035.1-201ENST00000411999 1115 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 TMBIM7P-201ENST00000418074 855 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AL354707.3-201ENST00000427308 331 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 GAPDHP33-201ENST00000443168 1013 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 RPL21P23-201ENST00000446654 460 ntBASIC7.07□□□□□ -1.28
CTC1Q2NKJ3 AC104308.1-201ENST00000454621 333 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms