Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NIFKP8-201ENST00000560500 874 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC068313.1-201ENST00000604028 1008 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 AC079395.3-201ENST00000615161 484 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 AC009464.1-201ENST00000615731 469 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC140113.4-201ENST00000622087 222 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC053481.2-202ENST00000582394 1500 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC010329.2-201ENST00000595195 2737 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 AC008758.3-201ENST00000507003 1829 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 BX005019.1-201ENST00000561881 1810 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 RNU6-636P-201ENST00000384598 107 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 MIR195-201ENST00000385194 87 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 TAS2R15P-201ENST00000390674 928 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 RNA5SP345-201ENST00000410646 108 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 RPL22P18-201ENST00000417197 377 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 MTCO2P21-201ENST00000419780 677 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC004448.2-201ENST00000422360 586 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 RPF2P1-201ENST00000424137 906 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 EIF4HP2-201ENST00000424380 563 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 RAC1P8-201ENST00000427086 527 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC007559.1-201ENST00000428736 355 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 DYNLL1P7-201ENST00000429273 258 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 RPL21P110-201ENST00000433345 446 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 AL589765.3-201ENST00000446084 462 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN20P56880 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN20P56880 AURKAPS2-201ENST00000454983 333 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 NAP1L1P3-201ENST00000462291 880 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN20P56880 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN20P56880 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 AL049839.1-201ENST00000556151 657 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN20P56880 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN20P56880 NTAN1P1-201ENST00000603150 646 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC010424.2-201ENST00000607594 443 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC116651.1-201ENST00000609724 556 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC243654.2-201ENST00000612843 443 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AL353726.1-201ENST00000614041 1000 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC011330.2-201ENST00000621680 635 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC005086.4-201ENST00000623065 213 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 LINC02211-204ENST00000642024 1070 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 AC017104.4-201ENST00000636283 1592 ntBASIC4.38□□□□□ -1.71
CLDN20P56880 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CLDN20P56880 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN20P56880 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN20P56880 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLDN20P56880 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLDN20P56880 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN20P56880 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 AC091046.3-201ENST00000631455 1574 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 AC008549.2-201ENST00000333482 706 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN20P56880 RNU4-92P-201ENST00000363783 136 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 RNU4-28P-201ENST00000364739 141 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN20P56880 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN20P56880 MIR585-201ENST00000384887 94 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 AL079342.2-201ENST00000403367 482 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 RNA5SP113-201ENST00000410486 84 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 RNU2-6P-201ENST00000411404 190 ntBASIC4.37□□□□□ -1.71
CLDN20P56880 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms