Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC108738.1-201ENST00000603703 237 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC024560.3-201ENST00000608482 349 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC068722.2-201ENST00000618734 544 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 AC008443.7-201ENST00000622195 246 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 AP003400.3-201ENST00000624904 346 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 AL049767.1-202ENST00000637826 242 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AL450326.2-201ENST00000421913 1962 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SUMO3P55854 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SUMO3P55854 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SUMO3P55854 Y_RNA.318-201ENST00000365131 97 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SUMO3P55854 RNA5SP339-201ENST00000390987 122 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC009804.1-201ENST00000400949 179 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 ZNF603P-201ENST00000405613 487 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AL512422.1-201ENST00000407033 553 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 AL953862.1-201ENST00000423016 168 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.89□□□□□ -1.63
SUMO3P55854 CYCSP12-201ENST00000437729 300 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 CEACAMP9-201ENST00000442990 513 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 CBX1P2-201ENST00000453841 458 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AL035090.1-201ENST00000454835 332 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 snoU13.7-201ENST00000459220 104 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC092757.1-201ENST00000467293 467 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 SETP11-201ENST00000473027 690 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 RN7SL547P-201ENST00000490793 290 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 AC069304.1-201ENST00000491593 704 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC108693.1-201ENST00000496068 432 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 HMGN1P9-201ENST00000515212 298 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 RNA5SP362-201ENST00000516048 118 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC107918.3-201ENST00000533272 382 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC011260.1-201ENST00000578420 472 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC083899.3-201ENST00000603413 594 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AL596327.1-201ENST00000603629 213 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC243773.3-201ENST00000613270 256 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC231657.1-201ENST00000624313 397 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 AC079228.1-201ENST00000624774 1049 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 SOCS5P3-201ENST00000425115 1576 ntBASIC4.89□□□□□ -1.63
SUMO3P55854 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.89□□□□□ -1.63
SUMO3P55854 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SUMO3P55854 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SUMO3P55854 AC083843.2-201ENST00000568248 6253 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 ERCC6-202ENST00000374127 1782 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 ZNF833P-201ENST00000424938 1494 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 AC090971.4-201ENST00000560291 1800 ntBASIC4.88□□□□□ -1.63
SUMO3P55854 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SUMO3P55854 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SUMO3P55854 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms