Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TUSC7.1-201ENST00000610969 165 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AC024257.5-201ENST00000612739 531 ntBASIC5.15□□□□□ -1.59
COPB1P53618 EIF3FP1-201ENST00000613970 806 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AP002799.1-201ENST00000623552 423 ntBASIC5.15□□□□□ -1.59
COPB1P53618 AP001784.1-201ENST00000624107 428 ntBASIC5.15□□□□□ -1.59
COPB1P53618 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
COPB1P53618 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 ZFRP1-201ENST00000457579 2970 ntBASIC5.15□□□□□ -1.59
COPB1P53618 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.15□□□□□ -1.59
COPB1P53618 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COPB1P53618 DDX18P4-201ENST00000511690 1966 ntBASIC5.15□□□□□ -1.59
COPB1P53618 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COPB1P53618 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 NCLP2-201ENST00000416078 1462 ntBASIC5.14□□□□□ -1.59
COPB1P53618 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 MAPK10-320ENST00000641462 6696 ntBASIC5.14□□□□□ -1.59
COPB1P53618 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COPB1P53618 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.14□□□□□ -1.59
COPB1P53618 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 RNU6-543P-201ENST00000362576 108 ntBASIC5.14□□□□□ -1.59
COPB1P53618 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 RNU6-83P-201ENST00000384568 112 ntBASIC5.14□□□□□ -1.59
COPB1P53618 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.14□□□□□ -1.59
COPB1P53618 CHEK2P3-201ENST00000416118 248 ntBASIC5.14□□□□□ -1.59
COPB1P53618 MORF4L1P6-201ENST00000418771 268 ntBASIC5.14□□□□□ -1.59
COPB1P53618 BX119904.4-201ENST00000424402 301 ntBASIC5.14□□□□□ -1.59
COPB1P53618 RPL21P43-201ENST00000425440 472 ntBASIC5.14□□□□□ -1.59
COPB1P53618 MTCO1P52-201ENST00000433928 531 ntBASIC5.14□□□□□ -1.59
COPB1P53618 ARL4AP3-201ENST00000441452 574 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.14□□□□□ -1.59
COPB1P53618 AC073850.1-201ENST00000449243 255 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AC233982.1-201ENST00000451247 436 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 CDC42P1-201ENST00000456658 548 ntBASIC5.14□□□□□ -1.59
COPB1P53618 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 AC093890.1-201ENST00000502554 540 ntBASIC5.14□□□□□ -1.59
COPB1P53618 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 RNA5SP446-201ENST00000515955 82 ntBASIC5.14□□□□□ -1.59
COPB1P53618 RNU6-1129P-201ENST00000515964 104 ntBASIC5.14□□□□□ -1.59
COPB1P53618 RNU5A-4P-201ENST00000516588 111 ntBASIC5.14□□□□□ -1.59
COPB1P53618 MTCO3P15-201ENST00000526563 574 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AP000926.4-201ENST00000527351 454 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.14□□□□□ -1.59
COPB1P53618 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.14□□□□□ -1.59
COPB1P53618 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.14□□□□□ -1.59
COPB1P53618 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.14□□□□□ -1.59
COPB1P53618 AP000255.1-201ENST00000610276 676 ntBASIC5.14□□□□□ -1.59
COPB1P53618 FAM27B-201ENST00000610601 213 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AL450489.1-201ENST00000612071 468 ntBASIC5.14□□□□□ -1.59
COPB1P53618 AL158163.2-201ENST00000619110 700 ntBASIC5.14□□□□□ -1.59
COPB1P53618 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.14□□□□□ -1.59
COPB1P53618 AC092435.4-201ENST00000623012 4159 ntBASIC5.14□□□□□ -1.59
COPB1P53618 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 AC104446.1-201ENST00000613728 1321 ntBASIC5.14□□□□□ -1.59
COPB1P53618 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COPB1P53618 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.14□□□□□ -1.59
COPB1P53618 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COPB1P53618 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 AC103591.2-201ENST00000265259 766 ntBASIC5.13□□□□□ -1.59
COPB1P53618 IL6STP1-201ENST00000346911 1020 ntBASIC5.13□□□□□ -1.59
COPB1P53618 SNORD116.1-201ENST00000365628 92 ntBASIC5.13□□□□□ -1.59
COPB1P53618 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COPB1P53618 AC136624.1-201ENST00000400791 413 ntBASIC5.13□□□□□ -1.59
COPB1P53618 Y_RNA.625-201ENST00000411256 107 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.13□□□□□ -1.59
COPB1P53618 LUZP4P1-201ENST00000415420 344 ntBASIC5.13□□□□□ -1.59
COPB1P53618 TAF13P2-201ENST00000416876 286 ntBASIC5.13□□□□□ -1.59
COPB1P53618 Z75741.2-201ENST00000417272 1167 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC093162.1-201ENST00000419682 124 ntBASIC5.13□□□□□ -1.59
COPB1P53618 MFSD13B-201ENST00000420133 1290 ntBASIC5.13□□□□□ -1.59
COPB1P53618 ZNF885P-201ENST00000420174 1098 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC004448.2-201ENST00000422360 586 ntBASIC5.13□□□□□ -1.59
COPB1P53618 NIPA2P1-201ENST00000426223 976 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.13□□□□□ -1.59
COPB1P53618 RAC1P8-201ENST00000427086 527 ntBASIC5.13□□□□□ -1.59
COPB1P53618 MOB1AP1-201ENST00000430903 535 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.13□□□□□ -1.59
COPB1P53618 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.13□□□□□ -1.59
COPB1P53618 AC073648.4-201ENST00000442655 781 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AC112498.1-201ENST00000444401 332 ntBASIC5.13□□□□□ -1.59
COPB1P53618 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms