Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 RN7SL708P-201ENST00000580952 299 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.26□□□□□ -1.57
NEK3P51956 AC061975.8-201ENST00000587058 721 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC097478.2-201ENST00000610572 514 ntBASIC5.26□□□□□ -1.57
NEK3P51956 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 AC107075.1-201ENST00000613695 314 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AC008147.4-201ENST00000617570 1204 ntBASIC5.26□□□□□ -1.57
NEK3P51956 AP000676.4-201ENST00000624659 623 ntBASIC5.26□□□□□ -1.57
NEK3P51956 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 MUC2-202ENST00000613187 4845 ntBASIC5.26□□□□□ -1.57
NEK3P51956 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NEK3P51956 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NEK3P51956 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NEK3P51956 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 AL122126.1-201ENST00000546905 1318 ntBASIC5.25□□□□□ -1.57
NEK3P51956 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 SCARNA15-201ENST00000607520 4325 ntBASIC5.25□□□□□ -1.57
NEK3P51956 SNORD116.1-201ENST00000365628 92 ntBASIC5.25□□□□□ -1.57
NEK3P51956 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 MIR506-201ENST00000384998 124 ntBASIC5.25□□□□□ -1.57
NEK3P51956 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NEK3P51956 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NEK3P51956 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NEK3P51956 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.25□□□□□ -1.57
NEK3P51956 RBMY2KP-201ENST00000418221 992 ntBASIC5.25□□□□□ -1.57
NEK3P51956 KRR1P1-201ENST00000419430 803 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 AC093162.1-201ENST00000419682 124 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 EI24P4-201ENST00000423683 1078 ntBASIC5.25□□□□□ -1.57
NEK3P51956 USP9YP11-201ENST00000427537 717 ntBASIC5.25□□□□□ -1.57
NEK3P51956 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 AC005345.1-201ENST00000431868 217 ntBASIC5.25□□□□□ -1.57
NEK3P51956 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 AL161722.2-201ENST00000434731 981 ntBASIC5.25□□□□□ -1.57
NEK3P51956 CLUHP1-201ENST00000435012 1190 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 RPS29P10-201ENST00000439197 166 ntBASIC5.25□□□□□ -1.57
NEK3P51956 GTF3AP5-201ENST00000442645 697 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 RN7SL826P-201ENST00000479724 288 ntBASIC5.25□□□□□ -1.57
NEK3P51956 RPL5P22-201ENST00000480199 884 ntBASIC5.25□□□□□ -1.57
NEK3P51956 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.25□□□□□ -1.57
NEK3P51956 NDUFA5P12-201ENST00000503796 343 ntBASIC5.25□□□□□ -1.57
NEK3P51956 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.25□□□□□ -1.57
NEK3P51956 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 NBEAP1-201ENST00000554452 979 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 MIR4504-201ENST00000577413 92 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 AC011840.5-201ENST00000582125 771 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC069366.1-201ENST00000583159 838 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.25□□□□□ -1.57
NEK3P51956 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 AC108359.1-201ENST00000616451 1211 ntBASIC5.25□□□□□ -1.57
NEK3P51956 AC118658.2-201ENST00000618697 459 ntBASIC5.25□□□□□ -1.57
NEK3P51956 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
NEK3P51956 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NEK3P51956 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NEK3P51956 ZNF33CP-201ENST00000432492 2030 ntBASIC5.24□□□□□ -1.57
NEK3P51956 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.24□□□□□ -1.57
NEK3P51956 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NEK3P51956 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms