Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 MAPK10-286ENST00000641208 8747 ntBASIC4.59□□□□□ -1.67
CENPAP49450 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 RNU6-707P-201ENST00000364647 95 ntBASIC4.59□□□□□ -1.67
CENPAP49450 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 SNORA67-201ENST00000384423 137 ntBASIC4.59□□□□□ -1.67
CENPAP49450 SNORA17A-201ENST00000391185 133 ntBASIC4.59□□□□□ -1.67
CENPAP49450 RPL35AP24-201ENST00000413846 330 ntBASIC4.59□□□□□ -1.67
CENPAP49450 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.59□□□□□ -1.67
CENPAP49450 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.59□□□□□ -1.67
CENPAP49450 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 RPL21P43-201ENST00000425440 472 ntBASIC4.59□□□□□ -1.67
CENPAP49450 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 NPM1P24-201ENST00000428039 894 ntBASIC4.59□□□□□ -1.67
CENPAP49450 RPL7L1P9-201ENST00000431298 745 ntBASIC4.59□□□□□ -1.67
CENPAP49450 RPS6P15-201ENST00000431996 751 ntBASIC4.59□□□□□ -1.67
CENPAP49450 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 AL118496.1-201ENST00000440201 1812 ntBASIC4.59□□□□□ -1.67
CENPAP49450 HMGB1P48-201ENST00000446155 598 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 NECAP1P2-201ENST00000455668 727 ntBASIC4.59□□□□□ -1.67
CENPAP49450 RPL37P3-201ENST00000456825 293 ntBASIC4.59□□□□□ -1.67
CENPAP49450 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 GAPDHP39-201ENST00000481866 979 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC104109.1-201ENST00000498563 436 ntBASIC4.59□□□□□ -1.67
CENPAP49450 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AC008562.1-201ENST00000521763 330 ntBASIC4.59□□□□□ -1.67
CENPAP49450 RPL23AP53-201ENST00000521854 457 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CENPAP49450 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 AL442163.2-201ENST00000553912 710 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.59□□□□□ -1.67
CENPAP49450 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 AC100778.3-201ENST00000580060 1750 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC022662.1-201ENST00000580252 331 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.59□□□□□ -1.67
CENPAP49450 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.59□□□□□ -1.67
CENPAP49450 AL139344.1-201ENST00000605228 195 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AC079395.2-201ENST00000610982 737 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC243654.2-201ENST00000612843 443 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.59□□□□□ -1.67
CENPAP49450 AC026368.1-201ENST00000614934 690 ntBASIC4.59□□□□□ -1.67
CENPAP49450 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.59□□□□□ -1.67
CENPAP49450 AC022106.2-201ENST00000620114 757 ntBASIC4.59□□□□□ -1.67
CENPAP49450 AC022079.1-201ENST00000621546 602 ntBASIC4.59□□□□□ -1.67
CENPAP49450 SNORA17.5-201ENST00000630429 132 ntBASIC4.59□□□□□ -1.67
CENPAP49450 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.59□□□□□ -1.68
CENPAP49450 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CENPAP49450 AP005901.5-201ENST00000545779 1796 ntBASIC4.58□□□□□ -1.68
CENPAP49450 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CENPAP49450 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CENPAP49450 U3.3-201ENST00000362986 216 ntBASIC4.58□□□□□ -1.68
CENPAP49450 RNU6-1214P-201ENST00000363650 109 ntBASIC4.58□□□□□ -1.68
CENPAP49450 RNA5SP242-201ENST00000364171 118 ntBASIC4.58□□□□□ -1.68
CENPAP49450 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 Y_RNA.465-201ENST00000384293 102 ntBASIC4.58□□□□□ -1.68
CENPAP49450 SNORA51.12-201ENST00000384448 134 ntBASIC4.58□□□□□ -1.68
CENPAP49450 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CENPAP49450 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 AC107081.1-201ENST00000414975 361 ntBASIC4.58□□□□□ -1.68
CENPAP49450 GTF2IP23-201ENST00000423746 351 ntBASIC4.58□□□□□ -1.68
CENPAP49450 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.58□□□□□ -1.68
CENPAP49450 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.58□□□□□ -1.68
CENPAP49450 FGF7P5-201ENST00000441829 291 ntBASIC4.58□□□□□ -1.68
CENPAP49450 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.58□□□□□ -1.68
CENPAP49450 AC104306.1-201ENST00000449702 371 ntBASIC4.58□□□□□ -1.68
CENPAP49450 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.58□□□□□ -1.68
CENPAP49450 SCARNA10-201ENST00000459255 330 ntBASIC4.58□□□□□ -1.68
CENPAP49450 RN7SL443P-201ENST00000464331 290 ntBASIC4.58□□□□□ -1.68
CENPAP49450 RPL7P39-201ENST00000481157 744 ntBASIC4.58□□□□□ -1.68
CENPAP49450 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.58□□□□□ -1.68
CENPAP49450 DYNLL1P6-201ENST00000503440 264 ntBASIC4.58□□□□□ -1.68
CENPAP49450 RPS4XP20-201ENST00000505751 772 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms