Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HMGB1P5-202ENST00000451497 985 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AC012671.1-201ENST00000451912 203 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL15A1P39059 AL591473.1-201ENST00000464297 313 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AC034236.1-201ENST00000469891 373 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AL132838.2-201ENST00000492041 314 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.61□□□□□ -1.51
COL15A1P39059 AC073387.2-201ENST00000604797 784 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AL135786.2-201ENST00000608422 615 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 AC022079.2-201ENST00000619739 566 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL15A1P39059 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
COL15A1P39059 AL133268.1-201ENST00000405676 1401 ntBASIC5.61□□□□□ -1.51
COL15A1P39059 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.61□□□□□ -1.51
COL15A1P39059 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
COL15A1P39059 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
COL15A1P39059 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 AC010266.2-201ENST00000564741 3255 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.6□□□□□ -1.51
COL15A1P39059 RNU6-729P-201ENST00000384399 107 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 FCF1P5-201ENST00000406490 482 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.6□□□□□ -1.51
COL15A1P39059 MTATP6P20-201ENST00000414147 562 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC092447.3-201ENST00000426027 686 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AC005189.1-201ENST00000431286 310 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC008280.2-201ENST00000455473 307 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.6□□□□□ -1.51
COL15A1P39059 EEF1A1P37-201ENST00000522748 715 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AL049870.4-201ENST00000555741 486 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 RN7SL600P-201ENST00000581811 299 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AC010201.1-201ENST00000605051 540 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AC004908.3-201ENST00000610248 625 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 MIR6867-201ENST00000610636 67 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AC009159.2-201ENST00000617603 606 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AC048344.4-201ENST00000619744 527 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AP000484.1-201ENST00000620067 1252 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.6□□□□□ -1.51
COL15A1P39059 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
COL15A1P39059 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.6□□□□□ -1.51
COL15A1P39059 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COL15A1P39059 AC139769.1-204ENST00000472297 1931 ntBASIC5.6□□□□□ -1.51
COL15A1P39059 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.59□□□□□ -1.51
COL15A1P39059 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 MUC2-202ENST00000613187 4845 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COL15A1P39059 RNU4-74P-201ENST00000411280 161 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 AL590806.1-201ENST00000415818 853 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 AC062016.2-201ENST00000420950 676 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
COL15A1P39059 AL096803.2-201ENST00000450032 677 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 RN7SL542P-201ENST00000467147 294 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.59□□□□□ -1.51
COL15A1P39059 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 AC108120.2-201ENST00000512973 294 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 RN7SKP287-201ENST00000516546 266 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
COL15A1P39059 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.59□□□□□ -1.51
COL15A1P39059 AC091178.1-203ENST00000584586 279 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 AC093424.1-201ENST00000604999 338 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 AC009464.1-201ENST00000615731 469 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.59□□□□□ -1.51
COL15A1P39059 AC015871.5-202ENST00000623252 701 ntBASIC5.59□□□□□ -1.51
COL15A1P39059 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COL15A1P39059 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
COL15A1P39059 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms