Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CYCSP43-201ENST00000438233 310 ntBASIC5.06□□□□□ -1.6
RFC4P35249 CYCSP53-201ENST00000455540 265 ntBASIC5.06□□□□□ -1.6
RFC4P35249 TPT1P1-201ENST00000458495 518 ntBASIC5.06□□□□□ -1.6
RFC4P35249 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 AC026427.2-201ENST00000506228 536 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 RNU7-143P-201ENST00000516781 65 ntBASIC5.06□□□□□ -1.6
RFC4P35249 NDUFA5P2-201ENST00000519723 344 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AC022616.2-201ENST00000523185 300 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 CYCSP28-201ENST00000534284 321 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 AC233702.9-201ENST00000581528 203 ntBASIC5.06□□□□□ -1.6
RFC4P35249 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
RFC4P35249 MIR432-201ENST00000606207 94 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AC026368.1-201ENST00000614934 690 ntBASIC5.06□□□□□ -1.6
RFC4P35249 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC4P35249 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC4P35249 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RFC4P35249 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
RFC4P35249 CASC19-284ENST00000642142 1868 ntBASIC5.05□□□□□ -1.6
RFC4P35249 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RFC4P35249 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 MIR183-201ENST00000384958 110 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AL359643.1-201ENST00000404109 423 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC4P35249 UBTFL3-201ENST00000418934 1024 ntBASIC5.05□□□□□ -1.6
RFC4P35249 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC4P35249 OR4F13P-201ENST00000428478 931 ntBASIC5.05□□□□□ -1.6
RFC4P35249 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC4P35249 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC4P35249 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.05□□□□□ -1.6
RFC4P35249 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC4P35249 UBTFL6-201ENST00000477929 1024 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 HMGN1P11-201ENST00000508668 303 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AC074250.1-201ENST00000511117 192 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.05□□□□□ -1.6
RFC4P35249 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 SNORA35B-201ENST00000607417 129 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AL354950.1-201ENST00000614150 568 ntBASIC5.05□□□□□ -1.6
RFC4P35249 AL138721.1-201ENST00000616756 179 ntBASIC5.05□□□□□ -1.6
RFC4P35249 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.05□□□□□ -1.6
RFC4P35249 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFC4P35249 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC4P35249 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RFC4P35249 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC4P35249 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RFC4P35249 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 HMGB3P19-201ENST00000403971 560 ntBASIC5.04□□□□□ -1.6
RFC4P35249 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 AL035423.1-201ENST00000420331 213 ntBASIC5.04□□□□□ -1.6
RFC4P35249 MTND4LP13-201ENST00000425022 298 ntBASIC5.04□□□□□ -1.6
RFC4P35249 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC4P35249 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC4P35249 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
RFC4P35249 UBE2CP3-201ENST00000502715 450 ntBASIC5.04□□□□□ -1.6
RFC4P35249 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC4P35249 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.04□□□□□ -1.6
RFC4P35249 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC4P35249 YPEL5P3-201ENST00000547227 352 ntBASIC5.04□□□□□ -1.6
RFC4P35249 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.04□□□□□ -1.6
RFC4P35249 AC005412.1-201ENST00000580812 1049 ntBASIC5.04□□□□□ -1.6
RFC4P35249 FAM106CP-201ENST00000582212 507 ntBASIC5.04□□□□□ -1.6
RFC4P35249 AL049634.3-201ENST00000604968 457 ntBASIC5.04□□□□□ -1.6
RFC4P35249 U3.45-201ENST00000607547 219 ntBASIC5.04□□□□□ -1.6
RFC4P35249 AL353726.1-201ENST00000614041 1000 ntBASIC5.04□□□□□ -1.6
RFC4P35249 AC005086.4-201ENST00000623065 213 ntBASIC5.04□□□□□ -1.6
RFC4P35249 U6.105-201ENST00000637379 88 ntBASIC5.04□□□□□ -1.6
RFC4P35249 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RFC4P35249 AP002001.2-201ENST00000529025 1469 ntBASIC5.04□□□□□ -1.6
RFC4P35249 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.04□□□□□ -1.6
RFC4P35249 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RFC4P35249 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFC4P35249 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.04□□□□□ -1.6
RFC4P35249 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 MTCO1P12-201ENST00000414273 1543 ntBASIC5.03□□□□□ -1.6
RFC4P35249 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFC4P35249 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RFC4P35249 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RFC4P35249 SNORD3H-201ENST00000384486 214 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms