Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PPIAP31-201ENST00000405422 495 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 AL691449.1-201ENST00000426570 421 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC011998.1-201ENST00000433403 117 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 RPL21P89-201ENST00000444021 467 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 OR52E3P-201ENST00000452083 936 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC090058.1-201ENST00000498788 435 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC010625.1-201ENST00000511296 403 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC006518.2-201ENST00000542513 940 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.38□□□□□ -1.55
POLR2AP24928 AC023813.2-201ENST00000564321 469 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 MIR4719-201ENST00000585233 84 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 AC015540.1-201ENST00000615828 501 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC091931.1-201ENST00000623488 728 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AP003072.4-201ENST00000624580 310 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC092104.1-201ENST00000497346 1441 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
POLR2AP24928 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
POLR2AP24928 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
POLR2AP24928 UBE2V1P10-201ENST00000414685 269 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 COX5BP7-201ENST00000414780 274 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 MTND4LP21-201ENST00000415303 295 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC069157.1-201ENST00000421749 137 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 ETF1P3-201ENST00000430422 1160 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC005189.1-201ENST00000431286 310 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 RPL23AP52-201ENST00000439311 478 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 ARL5AP3-201ENST00000439327 386 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AL357520.1-201ENST00000441557 453 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 DHFRP3-201ENST00000455595 559 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 RN7SL810P-201ENST00000493031 276 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
POLR2AP24928 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 RNU6-1178P-201ENST00000516674 107 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.38□□□□□ -1.55
POLR2AP24928 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 AC005832.2-201ENST00000538921 1430 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 CCNG2P1-201ENST00000549521 1000 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.38□□□□□ -1.55
POLR2AP24928 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
POLR2AP24928 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 AC016877.3-201ENST00000606778 504 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AC072039.2-201ENST00000608883 439 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AP000255.1-201ENST00000610276 676 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 AP003400.5-201ENST00000624827 617 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
POLR2AP24928 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
POLR2AP24928 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
POLR2AP24928 AL034370.1-201ENST00000397254 1590 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
POLR2AP24928 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
POLR2AP24928 CYP1D1P-201ENST00000416662 1433 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 RNA5SP453-201ENST00000362503 119 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 RNU4-51P-201ENST00000364206 140 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 RNU6-517P-201ENST00000384362 110 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 RNU4-64P-201ENST00000410795 131 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 RN7SKP33-201ENST00000410942 340 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.37□□□□□ -1.55
POLR2AP24928 MTND4P3-201ENST00000417829 541 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 TMBIM7P-201ENST00000418074 855 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 MTND4P20-201ENST00000424125 869 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 GOT2P5-201ENST00000433995 546 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.37□□□□□ -1.55
POLR2AP24928 AL358232.1-201ENST00000448030 501 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.37□□□□□ -1.55
POLR2AP24928 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
POLR2AP24928 AC004923.2-201ENST00000529649 369 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AC022880.1-201ENST00000534017 973 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AC023161.2-201ENST00000551218 780 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.37□□□□□ -1.55
POLR2AP24928 ZNF415P1-201ENST00000582279 1166 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 VN1R81P-201ENST00000602085 372 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.37□□□□□ -1.55
POLR2AP24928 AC005332.10-201ENST00000612725 619 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 AL603755.1-201ENST00000619504 163 ntBASIC5.37□□□□□ -1.55
POLR2AP24928 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms