Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN3P20807 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN3P20807 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN3P20807 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN3P20807 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.8□□□□□ -1.64
CAPN3P20807 MIR378J-201ENST00000611988 109 ntBASIC4.8□□□□□ -1.64
CAPN3P20807 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CAPN3P20807 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CAPN3P20807 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CAPN3P20807 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
CAPN3P20807 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC011493.1-201ENST00000596753 1632 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CAPN3P20807 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CAPN3P20807 RN7SKP113-201ENST00000363891 295 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RNU6-1243P-201ENST00000364028 107 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RNU1-43P-201ENST00000365052 165 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RNU6-925P-201ENST00000384629 104 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 VN1R51P-201ENST00000411675 945 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 TCEA1P2-201ENST00000420496 906 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 COX6CP17-201ENST00000421389 185 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RPS6P14-201ENST00000425165 719 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 COX6CP15-201ENST00000426313 211 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPN3P20807 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 B3GNT2P1-201ENST00000434960 952 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPN3P20807 TPT1P12-201ENST00000448968 492 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RPS3AP41-201ENST00000462701 778 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC092324.1-201ENST00000468671 324 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RN7SL385P-201ENST00000468873 276 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 NDUFA5P9-201ENST00000472609 340 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC020890.1-201ENST00000491837 504 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 CAB39P1-201ENST00000502277 460 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 GTF2F2P1-201ENST00000511083 675 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 RAB9BP1-201ENST00000519581 626 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC012339.2-201ENST00000523996 453 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC069307.1-201ENST00000602820 447 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AL020997.3-201ENST00000602843 359 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC011453.2-201ENST00000603737 729 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC087283.1-201ENST00000604029 1074 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 RNA5SP108-201ENST00000605921 117 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AL354760.1-201ENST00000608357 643 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AL035461.2-201ENST00000619201 524 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AL512506.2-201ENST00000624472 458 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC090506.2-201ENST00000624521 419 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC087821.2-201ENST00000637086 450 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC025031.4-201ENST00000621248 3271 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 AC009643.2-201ENST00000603543 1448 ntBASIC4.79□□□□□ -1.64
CAPN3P20807 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CAPN3P20807 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CAPN3P20807 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
CAPN3P20807 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CAPN3P20807 MTND5P31-201ENST00000419366 1374 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
CAPN3P20807 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.78□□□□□ -1.64
CAPN3P20807 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.78□□□□□ -1.64
CAPN3P20807 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.78□□□□□ -1.64
CAPN3P20807 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CAPN3P20807 NMD3P1-201ENST00000439704 1488 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 RNU1-85P-201ENST00000364127 164 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 RNU6-115P-201ENST00000364310 107 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 RNU4-4P-201ENST00000364588 130 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 CYB5AP4-201ENST00000396692 399 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.78□□□□□ -1.64
CAPN3P20807 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.78□□□□□ -1.64
CAPN3P20807 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.78□□□□□ -1.64
CAPN3P20807 RPL36P19-201ENST00000430744 301 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.78□□□□□ -1.64
CAPN3P20807 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.78□□□□□ -1.64
CAPN3P20807 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 RPS29P9-201ENST00000440360 171 ntBASIC4.78□□□□□ -1.64
CAPN3P20807 AL138878.2-201ENST00000440581 1241 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms