| MUC1 | P15941 | AC009268.1-201 | ENST00000561352 | 1203 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NUFIP2-202 | ENST00000579665 | 559 nt | TSL 1 (best) BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SATB1-AS1-222 | ENST00000600177 | 751 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC119501.1-201 | ENST00000603646 | 475 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TEX41-238 | ENST00000604253 | 709 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC010894.2-203 | ENST00000606406 | 499 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC092683.2-201 | ENST00000619740 | 621 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC020978.9-201 | ENST00000624380 | 1141 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC011944.2-201 | ENST00000624440 | 683 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AP000843.1-201 | ENST00000624880 | 701 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MIR3653-201 | ENST00000625572 | 110 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ABCD2-201 | ENST00000308666 | 6238 nt | APPRIS P1 TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL136964.1-201 | ENST00000622038 | 2990 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | GPBP1-205 | ENST00000511209 | 2243 nt | APPRIS ALT2 TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC01733-201 | ENST00000449316 | 4604 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | DTWD1-201 | ENST00000251250 | 13776 nt | APPRIS P1 TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC003035.1-201 | ENST00000391359 | 544 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RAB9AP4-201 | ENST00000415230 | 609 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC01821-201 | ENST00000419786 | 1084 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PTP4A1P5-201 | ENST00000420305 | 455 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL356535.1-201 | ENST00000440335 | 398 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | GPC6-AS2-201 | ENST00000445540 | 587 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC004994.1-201 | ENST00000447057 | 313 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC115989.1-202 | ENST00000452153 | 1150 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC01768-201 | ENST00000453347 | 476 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NDUFA5P9-201 | ENST00000472609 | 340 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC00971-203 | ENST00000491849 | 452 nt | TSL 3 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC069360.1-201 | ENST00000503469 | 431 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC108145.1-201 | ENST00000503770 | 153 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNA5SP519-201 | ENST00000516480 | 119 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU6-362P-201 | ENST00000516736 | 90 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NPM1P52-201 | ENST00000518264 | 846 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC018616.1-201 | ENST00000524085 | 546 nt | TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC021713.1-201 | ENST00000526554 | 510 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FOPNL-207 | ENST00000575073 | 530 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC067838.1-201 | ENST00000606064 | 577 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MIR486-1-201 | ENST00000612171 | 68 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL713922.2-201 | ENST00000619384 | 716 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC092628.2-201 | ENST00000622492 | 339 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL445363.3-201 | ENST00000623080 | 671 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | OR6Y1-202 | ENST00000641282 | 3702 nt | APPRIS P1 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MACC1-201 | ENST00000332878 | 2994 nt | APPRIS P1 TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ATP13A3-203 | ENST00000439040 | 7720 nt | APPRIS P1 TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNF38-201 | ENST00000259605 | 5012 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | GTDC1-202 | ENST00000344850 | 2607 nt | APPRIS P1 TSL 5 BASIC | 3.55 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SCN3A-201 | ENST00000283254 | 9091 nt | APPRIS P3 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | USH2A-201 | ENST00000307340 | 18883 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CDH10-201 | ENST00000264463 | 3438 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PARP8-211 | ENST00000505554 | 3825 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | USP50-205 | ENST00000616326 | 1419 nt | APPRIS ALT2 TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ZNF638-203 | ENST00000409544 | 6821 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FAN1-202 | ENST00000561594 | 2738 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ADGRL2-210 | ENST00000370728 | 6302 nt | APPRIS ALT2 TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CSNK1G3-210 | ENST00000521364 | 2580 nt | APPRIS ALT2 TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | OR14C36-201 | ENST00000317861 | 939 nt | APPRIS P1 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MIR383-201 | ENST00000362257 | 73 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU1-87P-201 | ENST00000363727 | 170 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU6-670P-201 | ENST00000364312 | 104 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | DPRX-201 | ENST00000376650 | 648 nt | APPRIS P1 TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | OR6C69P-201 | ENST00000394268 | 893 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL583835.1-201 | ENST00000399570 | 407 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RN7SKP182-201 | ENST00000410772 | 298 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU6-564P-201 | ENST00000410983 | 104 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NRBF2P2-201 | ENST00000413087 | 861 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL354766.2-201 | ENST00000414085 | 423 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC097467.3-223 | ENST00000417474 | 449 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | DNAJA1P1-201 | ENST00000425106 | 1187 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FTH1P6-201 | ENST00000430768 | 320 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC016712.1-201 | ENST00000431088 | 378 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | BTF3P10-201 | ENST00000433415 | 495 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TRIM60P9Y-201 | ENST00000438459 | 816 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CXorf51B-201 | ENST00000438525 | 436 nt | APPRIS P1 TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TRIM60P11Y-201 | ENST00000445313 | 801 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC010235.1-201 | ENST00000450613 | 547 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC243772.1-201 | ENST00000451620 | 410 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RAD23BP3-201 | ENST00000454157 | 1152 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | C1DP3-201 | ENST00000455013 | 423 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC109327.1-201 | ENST00000471666 | 403 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PDCD10-207 | ENST00000471885 | 764 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC069499.1-201 | ENST00000489433 | 509 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC025187.1-201 | ENST00000506305 | 686 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC099522.1-202 | ENST00000514718 | 367 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | IGKV2D-10-201 | ENST00000520194 | 281 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | C14orf2-211 | ENST00000557040 | 472 nt | APPRIS P1 TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC144836.1-201 | ENST00000575911 | 340 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AMZ2-204 | ENST00000577273 | 895 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC245128.3-201 | ENST00000594721 | 748 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC00397-202 | ENST00000606785 | 409 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC006338.2-201 | ENST00000616864 | 791 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | UBE2NL-201 | ENST00000618570 | 1185 nt | APPRIS P1 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | HMGN2-210 | ENST00000619352 | 1148 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC005858.1-201 | ENST00000620193 | 677 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MIR8059-201 | ENST00000620427 | 81 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LYRM2-211 | ENST00000626778 | 696 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FAM26D-205 | ENST00000628083 | 1117 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | DDAH1-206 | ENST00000633113 | 703 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AF067845.5-201 | ENST00000633906 | 437 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC107068.2-201 | ENST00000634611 | 447 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC008013.2-202 | ENST00000637965 | 364 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| MUC1 | P15941 | IQGAP2-202 | ENST00000379730 | 5442 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |