Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP2AP11388 RNU4-35P-201ENST00000362588 141 ntBASIC6.49□□□□□ -1.37
TOP2AP11388 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TOP2AP11388 OSTCP5-201ENST00000425293 453 ntBASIC6.49□□□□□ -1.37
TOP2AP11388 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.49□□□□□ -1.37
TOP2AP11388 AC108941.1-201ENST00000502853 530 ntBASIC6.49□□□□□ -1.37
TOP2AP11388 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.49□□□□□ -1.37
TOP2AP11388 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP2AP11388 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.49□□□□□ -1.37
TOP2AP11388 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC6.49□□□□□ -1.37
TOP2AP11388 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TOP2AP11388 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP2AP11388 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
TOP2AP11388 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TOP2AP11388 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP2AP11388 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.48□□□□□ -1.37
TOP2AP11388 KCTD9P3-201ENST00000434597 1169 ntBASIC6.48□□□□□ -1.37
TOP2AP11388 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP2AP11388 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.48□□□□□ -1.37
TOP2AP11388 RN7SKP57-201ENST00000517248 293 ntBASIC6.48□□□□□ -1.37
TOP2AP11388 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.48□□□□□ -1.37
TOP2AP11388 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TOP2AP11388 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.48□□□□□ -1.37
TOP2AP11388 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.48□□□□□ -1.37
TOP2AP11388 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TOP2AP11388 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TOP2AP11388 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP2AP11388 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
TOP2AP11388 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TOP2AP11388 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP2AP11388 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TOP2AP11388 DDX18P4-201ENST00000511690 1966 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP2AP11388 GSTM3P2-201ENST00000412746 530 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP2AP11388 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.47□□□□□ -1.37
TOP2AP11388 DCLRE1CP1-201ENST00000454630 470 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.47□□□□□ -1.37
TOP2AP11388 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP2AP11388 MIR8057-201ENST00000620957 69 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.47□□□□□ -1.37
TOP2AP11388 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP2AP11388 HCFC2P1-201ENST00000392864 1592 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 MFSD8-236ENST00000641509 4050 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TOP2AP11388 AC008079.2-201ENST00000623543 20396 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 MAPK10-253ENST00000641010 4072 ntBASIC6.47□□□□□ -1.37
TOP2AP11388 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TOP2AP11388 MUC2-202ENST00000613187 4845 ntBASIC6.46□□□□□ -1.37
TOP2AP11388 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TOP2AP11388 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.46□□□□□ -1.37
TOP2AP11388 AL645931.1-201ENST00000439737 410 ntBASIC6.46□□□□□ -1.37
TOP2AP11388 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.46□□□□□ -1.37
TOP2AP11388 GTF2IP8-201ENST00000560687 584 ntBASIC6.46□□□□□ -1.37
TOP2AP11388 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.46□□□□□ -1.37
TOP2AP11388 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TOP2AP11388 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TOP2AP11388 CDY3P-201ENST00000454543 1618 ntBASIC6.46□□□□□ -1.38
TOP2AP11388 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TOP2AP11388 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TOP2AP11388 HSFY4P-201ENST00000415994 1181 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 AL391219.1-201ENST00000422570 483 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 SETP6-201ENST00000479329 568 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.45□□□□□ -1.38
TOP2AP11388 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.45□□□□□ -1.38
TOP2AP11388 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
TOP2AP11388 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 RNA5SP146-201ENST00000410743 123 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 AC245054.1-201ENST00000420944 258 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.45□□□□□ -1.38
TOP2AP11388 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.45□□□□□ -1.38
TOP2AP11388 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.45□□□□□ -1.38
TOP2AP11388 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.45□□□□□ -1.38
TOP2AP11388 RNU2-27P-201ENST00000516185 142 ntBASIC6.45□□□□□ -1.38
TOP2AP11388 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.45□□□□□ -1.38
TOP2AP11388 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.45□□□□□ -1.38
TOP2AP11388 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC6.45□□□□□ -1.38
TOP2AP11388 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.45□□□□□ -1.38
TOP2AP11388 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TOP2AP11388 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.45□□□□□ -1.38
TOP2AP11388 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TOP2AP11388 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOP2AP11388 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOP2AP11388 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TOP2AP11388 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TOP2AP11388 AC097504.1-201ENST00000515103 2415 ntBASIC6.44□□□□□ -1.38
TOP2AP11388 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TOP2AP11388 RNA5SP50-201ENST00000363731 107 ntBASIC6.44□□□□□ -1.38
TOP2AP11388 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.44□□□□□ -1.38
TOP2AP11388 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.44□□□□□ -1.38
TOP2AP11388 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.44□□□□□ -1.38
TOP2AP11388 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.44□□□□□ -1.38
TOP2AP11388 AC006480.1-201ENST00000449887 378 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms