Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.58□□□□□ -1.68
VTNP04004 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.58□□□□□ -1.68
VTNP04004 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.58□□□□□ -1.68
VTNP04004 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.58□□□□□ -1.68
VTNP04004 AC233702.9-201ENST00000581528 203 ntBASIC4.58□□□□□ -1.68
VTNP04004 AC093227.2-201ENST00000589357 285 ntBASIC4.58□□□□□ -1.68
VTNP04004 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.58□□□□□ -1.68
VTNP04004 AC068020.1-201ENST00000594215 661 ntBASIC4.58□□□□□ -1.68
VTNP04004 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTNP04004 BNIP3P27-201ENST00000599991 412 ntBASIC4.58□□□□□ -1.68
VTNP04004 MTATP6P2-201ENST00000603319 678 ntBASIC4.58□□□□□ -1.68
VTNP04004 BNIP3P31-201ENST00000604515 566 ntBASIC4.58□□□□□ -1.68
VTNP04004 AC024933.1-201ENST00000608472 348 ntBASIC4.58□□□□□ -1.68
VTNP04004 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTNP04004 MIR7151-201ENST00000617477 60 ntBASIC4.58□□□□□ -1.68
VTNP04004 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.58□□□□□ -1.68
VTNP04004 AL590396.2-201ENST00000636511 1041 ntBASIC4.58□□□□□ -1.68
VTNP04004 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VTNP04004 AC116667.1-201ENST00000604855 2072 ntBASIC4.58□□□□□ -1.68
VTNP04004 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTNP04004 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VTNP04004 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.58□□□□□ -1.68
VTNP04004 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTNP04004 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
VTNP04004 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
VTNP04004 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
VTNP04004 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VTNP04004 MIR1179-201ENST00000408703 91 ntBASIC4.57□□□□□ -1.68
VTNP04004 AP000357.1-201ENST00000409926 1165 ntBASIC4.57□□□□□ -1.68
VTNP04004 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.57□□□□□ -1.68
VTNP04004 RPL36AP36-201ENST00000418616 301 ntBASIC4.57□□□□□ -1.68
VTNP04004 UBE2D3P3-201ENST00000426992 425 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 HSFY7P-201ENST00000432672 318 ntBASIC4.57□□□□□ -1.68
VTNP04004 HSFY8P-201ENST00000437934 318 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC006011.1-201ENST00000442758 349 ntBASIC4.57□□□□□ -1.68
VTNP04004 GXYLT1P1-201ENST00000446657 490 ntBASIC4.57□□□□□ -1.68
VTNP04004 AL035551.1-201ENST00000446931 348 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 HSFY5P-201ENST00000453726 309 ntBASIC4.57□□□□□ -1.68
VTNP04004 PSMC1P13-201ENST00000458195 985 ntBASIC4.57□□□□□ -1.68
VTNP04004 TPT1P3-201ENST00000492841 512 ntBASIC4.57□□□□□ -1.68
VTNP04004 SUMO1P1-201ENST00000497904 306 ntBASIC4.57□□□□□ -1.68
VTNP04004 CAB39P1-201ENST00000502277 460 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.57□□□□□ -1.68
VTNP04004 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.57□□□□□ -1.68
VTNP04004 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.57□□□□□ -1.68
VTNP04004 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.57□□□□□ -1.68
VTNP04004 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 PHBP17-201ENST00000528576 541 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.57□□□□□ -1.68
VTNP04004 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 AC034105.4-201ENST00000568304 277 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC104072.1-201ENST00000568817 668 ntBASIC4.57□□□□□ -1.68
VTNP04004 MIR4286-201ENST00000580651 93 ntBASIC4.57□□□□□ -1.68
VTNP04004 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.57□□□□□ -1.68
VTNP04004 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 FAM91A3P-201ENST00000456826 2544 ntBASIC4.57□□□□□ -1.68
VTNP04004 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 Z82217.1-201ENST00000625157 8149 ntBASIC4.57□□□□□ -1.68
VTNP04004 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
VTNP04004 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 AC083843.3-201ENST00000623679 2186 ntBASIC4.57□□□□□ -1.68
VTNP04004 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTNP04004 AC104118.1-201ENST00000607625 1589 ntBASIC4.57□□□□□ -1.68
VTNP04004 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VTNP04004 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTNP04004 USP9YP4-201ENST00000424401 1745 ntBASIC4.56□□□□□ -1.68
VTNP04004 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.56□□□□□ -1.68
VTNP04004 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VTNP04004 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 RNU6-31P-201ENST00000384388 108 ntBASIC4.56□□□□□ -1.68
VTNP04004 ATP5F1P6-201ENST00000402768 767 ntBASIC4.56□□□□□ -1.68
VTNP04004 RNU4-6P-201ENST00000410804 122 ntBASIC4.56□□□□□ -1.68
VTNP04004 AC069282.1-201ENST00000411911 526 ntBASIC4.56□□□□□ -1.68
VTNP04004 RPL26P37-201ENST00000411983 438 ntBASIC4.56□□□□□ -1.68
VTNP04004 OR13Z1P-201ENST00000416141 834 ntBASIC4.56□□□□□ -1.68
VTNP04004 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
VTNP04004 AC115285.1-201ENST00000424879 736 ntBASIC4.56□□□□□ -1.68
VTNP04004 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.56□□□□□ -1.68
VTNP04004 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.56□□□□□ -1.68
VTNP04004 AC021205.1-201ENST00000468797 348 ntBASIC4.56□□□□□ -1.68
VTNP04004 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms