Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 AC068790.5-201ENST00000602741 355 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.56□□□□□ -1.84
SPTA1P02549 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.56□□□□□ -1.84
SPTA1P02549 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SPTA1P02549 AL513548.1-201ENST00000562904 1724 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 UBA52P6-201ENST00000399822 382 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.56□□□□□ -1.84
SPTA1P02549 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 IGHV3-32-201ENST00000519182 355 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.56□□□□□ -1.84
SPTA1P02549 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 AC244258.1-201ENST00000637553 1071 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SPTA1P02549 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.56□□□□□ -1.84
SPTA1P02549 AL078604.1-201ENST00000404609 466 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.55□□□□□ -1.84
SPTA1P02549 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.55□□□□□ -1.84
SPTA1P02549 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 UBDP1-202ENST00000457888 382 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AC006517.1-201ENST00000480485 328 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AC027176.2-201ENST00000559166 746 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.55□□□□□ -1.84
SPTA1P02549 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
SPTA1P02549 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.55□□□□□ -1.84
SPTA1P02549 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.55□□□□□ -1.84
SPTA1P02549 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.55□□□□□ -1.84
SPTA1P02549 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 OR10J6P-201ENST00000289731 930 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 TRIM60P17-201ENST00000415181 719 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 RPS4XP10-201ENST00000465034 731 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AC005726.1-201ENST00000494679 427 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.55□□□□□ -1.84
SPTA1P02549 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.55□□□□□ -1.84
SPTA1P02549 AC015914.2-201ENST00000618167 288 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 ATE1-AS1-202ENST00000636460 506 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.55□□□□□ -1.84
SPTA1P02549 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.55□□□□□ -1.84
SPTA1P02549 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.55□□□□□ -1.84
SPTA1P02549 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.55□□□□□ -1.84
SPTA1P02549 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SPTA1P02549 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPTA1P02549 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SPTA1P02549 MIR1251-201ENST00000408552 70 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 MIR1911-201ENST00000410783 80 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 MTND2P15-201ENST00000418575 892 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AL035423.1-201ENST00000420331 213 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC073387.1-201ENST00000453261 709 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 SNORD105B-201ENST00000458770 79 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPTA1P02549 MIR4660-201ENST00000583549 74 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC008833.1-201ENST00000611633 691 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC125257.1-201ENST00000560400 2930 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SPTA1P02549 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.54□□□□□ -1.84
SPTA1P02549 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.54□□□□□ -1.84
SPTA1P02549 AP002001.2-201ENST00000529025 1469 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.54□□□□□ -1.84
SPTA1P02549 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SPTA1P02549 RNA5SP399-201ENST00000364003 117 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 SNORA48.5-201ENST00000391143 135 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 EIF4A1P1-201ENST00000420241 934 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 TCEA1P2-201ENST00000420496 906 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 RPS26P4-201ENST00000431743 355 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AL121890.1-201ENST00000435457 205 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC025750.2-201ENST00000442609 450 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 RPL23AP65-201ENST00000475608 468 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.54□□□□□ -1.84
SPTA1P02549 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.54□□□□□ -1.84
SPTA1P02549 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.54□□□□□ -1.84
SPTA1P02549 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.54□□□□□ -1.84
SPTA1P02549 AC114878.2-201ENST00000604863 1251 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
SPTA1P02549 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.54□□□□□ -1.84
SPTA1P02549 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPTA1P02549 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SPTA1P02549 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms