Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LDLRP01130 RNU1-20P-201ENST00000363314 162 ntBASIC4.56□□□□□ -1.68
LDLRP01130 U6.112-201ENST00000384129 70 ntBASIC4.56□□□□□ -1.68
LDLRP01130 RNU6-298P-201ENST00000390888 96 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AL603865.2-201ENST00000401679 213 ntBASIC4.56□□□□□ -1.68
LDLRP01130 HDGFP1-201ENST00000405943 252 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AL080315.1-201ENST00000406055 466 ntBASIC4.56□□□□□ -1.68
LDLRP01130 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
LDLRP01130 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 AL358176.3-201ENST00000420757 454 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 RPS20P1-201ENST00000434853 354 ntBASIC4.56□□□□□ -1.68
LDLRP01130 FTH1P16-201ENST00000435241 552 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 snoU109.3-201ENST00000459477 145 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 AC011005.3-201ENST00000491624 395 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC010350.1-201ENST00000504908 231 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC111000.3-201ENST00000508057 576 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 RN7SKP122-201ENST00000515923 296 ntBASIC4.56□□□□□ -1.68
LDLRP01130 SNORA19.3-201ENST00000516165 130 ntBASIC4.56□□□□□ -1.68
LDLRP01130 RN7SKP21-201ENST00000516503 220 ntBASIC4.56□□□□□ -1.68
LDLRP01130 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.56□□□□□ -1.68
LDLRP01130 AC021451.1-201ENST00000523498 1129 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.56□□□□□ -1.68
LDLRP01130 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 CYCSP28-201ENST00000534284 321 ntBASIC4.56□□□□□ -1.68
LDLRP01130 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 AC011611.5-201ENST00000552477 578 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 AL512782.1-201ENST00000603093 364 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC090948.2-201ENST00000607363 564 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC006386.1-201ENST00000619436 415 ntBASIC4.56□□□□□ -1.68
LDLRP01130 AC022079.2-201ENST00000619739 566 ntBASIC4.56□□□□□ -1.68
LDLRP01130 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.56□□□□□ -1.68
LDLRP01130 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
LDLRP01130 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.56□□□□□ -1.68
LDLRP01130 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 AC106754.1-201ENST00000562632 1513 ntBASIC4.56□□□□□ -1.68
LDLRP01130 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 SEPT7P7-201ENST00000420492 1301 ntBASIC4.55□□□□□ -1.68
LDLRP01130 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 RNU1-94P-201ENST00000362627 173 ntBASIC4.55□□□□□ -1.68
LDLRP01130 SNORA62.2-201ENST00000364672 152 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LDLRP01130 MIR1193-201ENST00000408109 78 ntBASIC4.55□□□□□ -1.68
LDLRP01130 RN7SKP100-201ENST00000411258 284 ntBASIC4.55□□□□□ -1.68
LDLRP01130 RPS27AP7-201ENST00000422792 455 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC115285.1-201ENST00000424879 736 ntBASIC4.55□□□□□ -1.68
LDLRP01130 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AL158073.1-201ENST00000426848 1104 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 SETP8-201ENST00000435341 628 ntBASIC4.55□□□□□ -1.68
LDLRP01130 RPL7P11-201ENST00000437586 658 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.55□□□□□ -1.68
LDLRP01130 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 AC073587.1-201ENST00000447093 876 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AL354714.3-201ENST00000447284 493 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.55□□□□□ -1.68
LDLRP01130 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.55□□□□□ -1.68
LDLRP01130 AC104164.3-201ENST00000467363 1258 ntBASIC4.55□□□□□ -1.68
LDLRP01130 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.55□□□□□ -1.68
LDLRP01130 RN7SL41P-201ENST00000476144 297 ntBASIC4.55□□□□□ -1.68
LDLRP01130 RPS4XP6-201ENST00000477670 797 ntBASIC4.55□□□□□ -1.68
LDLRP01130 AC104687.1-201ENST00000485829 412 ntBASIC4.55□□□□□ -1.68
LDLRP01130 RN7SKP92-201ENST00000517266 244 ntBASIC4.55□□□□□ -1.68
LDLRP01130 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms