Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.44□□□□□ -1.7
NKX2-2O95096 KRT19P6-201ENST00000510983 209 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RNU6-488P-201ENST00000515918 99 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 SNORD116-26-201ENST00000516006 96 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AP000676.2-201ENST00000529711 301 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 FKBP1BP1-201ENST00000553366 325 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 EDDM3DP-201ENST00000554692 434 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC084757.1-201ENST00000559987 490 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 MIR4646-201ENST00000580775 63 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 MIR4472-2-201ENST00000582069 67 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC069304.3-201ENST00000603938 1084 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AP003973.1-201ENST00000604639 691 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC093424.1-201ENST00000604999 338 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC069545.1-201ENST00000605671 358 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC133644.2-201ENST00000608142 540 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC024257.5-201ENST00000612739 531 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 MIR6719-201ENST00000622428 87 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AL356863.1-201ENST00000623378 1080 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 IRF5P1-201ENST00000504852 2164 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NKX2-2O95096 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 SOCS5P3-201ENST00000425115 1576 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-2O95096 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-2O95096 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC016716.1-201ENST00000265882 708 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-2O95096 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-2O95096 RNU6-413P-201ENST00000384115 107 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AL139098.1-201ENST00000407291 389 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-2O95096 COX6B1P1-201ENST00000415962 213 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 HIGD1AP15-201ENST00000416198 280 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RPL22P18-201ENST00000417197 377 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 DPRXP1-201ENST00000426312 460 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RPL12P18-201ENST00000437175 325 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 PPIAP17-201ENST00000438507 471 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-2O95096 TPTE2P3-201ENST00000441562 1189 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AL589765.3-201ENST00000446084 462 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 PTMAP3-201ENST00000447474 330 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-2O95096 RPS15AP1-201ENST00000457423 391 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RN7SL515P-201ENST00000463999 297 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RN7SL329P-201ENST00000467740 299 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC104971.1-201ENST00000495117 578 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-2O95096 MTND4LP2-201ENST00000502312 285 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC084024.2-201ENST00000503480 791 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC109471.1-201ENST00000511631 612 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC138938.1-201ENST00000515431 782 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AL671862.1-201ENST00000515851 349 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RNU6-202P-201ENST00000515998 96 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 RNU1-6P-201ENST00000516290 144 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AP001207.1-201ENST00000524051 481 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC133555.2-201ENST00000550213 292 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.43□□□□□ -1.7
NKX2-2O95096 AC044860.2-201ENST00000561005 179 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 AC090695.1-201ENST00000561269 1222 ntBASIC4.43□□□□□ -1.7
NKX2-2O95096 BGLT3-201ENST00000564523 994 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms