Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.35□□□□□ -1.71
SSX4O60224 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.35□□□□□ -1.71
SSX4O60224 AC002487.1-201ENST00000604565 994 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AL355816.2-201ENST00000610049 647 ntBASIC4.35□□□□□ -1.71
SSX4O60224 PART1_2.1-201ENST00000612397 250 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AC112694.2-201ENST00000623697 768 ntBASIC4.35□□□□□ -1.71
SSX4O60224 AP003072.4-201ENST00000624580 310 ntBASIC4.35□□□□□ -1.71
SSX4O60224 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.35□□□□□ -1.71
SSX4O60224 AL049737.1-201ENST00000413920 1403 ntBASIC4.35□□□□□ -1.71
SSX4O60224 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSX4O60224 AL118496.1-201ENST00000440201 1812 ntBASIC4.35□□□□□ -1.71
SSX4O60224 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
SSX4O60224 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SSX4O60224 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX4O60224 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX4O60224 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSX4O60224 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
SSX4O60224 Z97832.1-201ENST00000402490 328 ntBASIC4.34□□□□□ -1.71
SSX4O60224 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX4O60224 AC009237.10-201ENST00000414112 510 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 RGS17P1-201ENST00000423358 553 ntBASIC4.34□□□□□ -1.71
SSX4O60224 C1DP1-201ENST00000426049 402 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX4O60224 NMNAT1P2-201ENST00000435192 860 ntBASIC4.34□□□□□ -1.71
SSX4O60224 RPS26P2-201ENST00000440331 348 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AL357520.1-201ENST00000441557 453 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC112498.1-201ENST00000444401 332 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 EIF4A1P11-201ENST00000451239 222 ntBASIC4.34□□□□□ -1.71
SSX4O60224 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX4O60224 AC091180.1-201ENST00000462104 372 ntBASIC4.34□□□□□ -1.71
SSX4O60224 NAP1L1P3-201ENST00000462291 880 ntBASIC4.34□□□□□ -1.71
SSX4O60224 PPIAP21-201ENST00000464473 501 ntBASIC4.34□□□□□ -1.71
SSX4O60224 CCDC75P1-201ENST00000469247 791 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC079203.1-201ENST00000487972 404 ntBASIC4.34□□□□□ -1.71
SSX4O60224 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 COX6B1P5-201ENST00000509843 249 ntBASIC4.34□□□□□ -1.71
SSX4O60224 BTF3P13-201ENST00000513224 490 ntBASIC4.34□□□□□ -1.71
SSX4O60224 MTND2P32-201ENST00000521584 1038 ntBASIC4.34□□□□□ -1.71
SSX4O60224 SMARCE1P4-201ENST00000523647 241 ntBASIC4.34□□□□□ -1.71
SSX4O60224 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 OR10V3P-201ENST00000525712 725 ntBASIC4.34□□□□□ -1.71
SSX4O60224 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.34□□□□□ -1.71
SSX4O60224 AC021006.3-201ENST00000530771 192 ntBASIC4.34□□□□□ -1.71
SSX4O60224 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX4O60224 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.34□□□□□ -1.71
SSX4O60224 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.34□□□□□ -1.71
SSX4O60224 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SSX4O60224 RPP40P2-201ENST00000603596 712 ntBASIC4.34□□□□□ -1.71
SSX4O60224 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.34□□□□□ -1.71
SSX4O60224 LINC00901.1-201ENST00000617252 152 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC140113.4-201ENST00000622087 222 ntBASIC4.34□□□□□ -1.71
SSX4O60224 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.34□□□□□ -1.71
SSX4O60224 AC009643.2-201ENST00000603543 1448 ntBASIC4.34□□□□□ -1.71
SSX4O60224 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.34□□□□□ -1.71
SSX4O60224 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSX4O60224 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
SSX4O60224 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.72
SSX4O60224 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SSX4O60224 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SSX4O60224 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
SSX4O60224 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSX4O60224 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 AC025263.3-201ENST00000622965 1396 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL512646.1-201ENST00000269395 1077 ntBASIC4.33□□□□□ -1.72
SSX4O60224 RNA5SP428-201ENST00000365129 132 ntBASIC4.33□□□□□ -1.72
SSX4O60224 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SSX4O60224 RNU6-224P-201ENST00000384055 107 ntBASIC4.33□□□□□ -1.72
SSX4O60224 SNORA51.12-201ENST00000384448 134 ntBASIC4.33□□□□□ -1.72
SSX4O60224 MTCO1P56-201ENST00000401674 224 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL121834.1-202ENST00000404494 277 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AP002530.1-201ENST00000405705 684 ntBASIC4.33□□□□□ -1.72
SSX4O60224 RPL31P52-201ENST00000407532 367 ntBASIC4.33□□□□□ -1.72
SSX4O60224 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.33□□□□□ -1.72
SSX4O60224 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.33□□□□□ -1.72
SSX4O60224 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
SSX4O60224 USP12PY-201ENST00000427677 1064 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms