Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL049838.1-201ENST00000563647 981 ntBASIC4.41□□□□□ -1.7
TO15178 AC093249.4-201ENST00000564755 259 ntBASIC4.41□□□□□ -1.7
TO15178 UBE2FP2-201ENST00000566646 462 ntBASIC4.41□□□□□ -1.7
TO15178 MTND1P8-201ENST00000571424 950 ntBASIC4.41□□□□□ -1.7
TO15178 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.41□□□□□ -1.7
TO15178 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.41□□□□□ -1.7
TO15178 AC115085.1-201ENST00000588924 229 ntBASIC4.41□□□□□ -1.7
TO15178 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 NTAN1P1-201ENST00000603150 646 ntBASIC4.41□□□□□ -1.7
TO15178 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TO15178 AC112220.2-201ENST00000605513 533 ntBASIC4.41□□□□□ -1.7
TO15178 VN1R74P-201ENST00000613259 503 ntBASIC4.41□□□□□ -1.7
TO15178 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.41□□□□□ -1.7
TO15178 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
TO15178 BX649567.1-201ENST00000642071 1134 ntBASIC4.41□□□□□ -1.7
TO15178 AC092162.3-201ENST00000624511 1624 ntBASIC4.41□□□□□ -1.7
TO15178 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.41□□□□□ -1.7
TO15178 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TO15178 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TO15178 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TO15178 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TO15178 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
TO15178 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.4□□□□□ -1.7
TO15178 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.4□□□□□ -1.7
TO15178 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.4□□□□□ -1.7
TO15178 AC090229.1-201ENST00000590983 1609 ntBASIC4.4□□□□□ -1.7
TO15178 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TO15178 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TO15178 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TO15178 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TO15178 AP000568.1-201ENST00000282964 442 ntBASIC4.4□□□□□ -1.71
TO15178 ANKRD36P1-201ENST00000344424 659 ntBASIC4.4□□□□□ -1.71
TO15178 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
TO15178 RNU6-353P-201ENST00000364266 108 ntBASIC4.4□□□□□ -1.71
TO15178 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
TO15178 MCTS2P-201ENST00000394552 546 ntBASIC4.4□□□□□ -1.71
TO15178 AL590762.2-201ENST00000395798 571 ntBASIC4.4□□□□□ -1.71
TO15178 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.4□□□□□ -1.71
TO15178 MTND4P3-201ENST00000417829 541 ntBASIC4.4□□□□□ -1.71
TO15178 AC114814.2-201ENST00000419195 485 ntBASIC4.4□□□□□ -1.71
TO15178 AC004074.1-201ENST00000421810 1063 ntBASIC4.4□□□□□ -1.71
TO15178 AC092634.2-201ENST00000428146 1010 ntBASIC4.4□□□□□ -1.71
TO15178 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.4□□□□□ -1.71
TO15178 MTCYBP15-201ENST00000433123 1127 ntBASIC4.4□□□□□ -1.71
TO15178 NMNAT1P2-201ENST00000435192 860 ntBASIC4.4□□□□□ -1.71
TO15178 AC004938.1-201ENST00000438468 308 ntBASIC4.4□□□□□ -1.71
TO15178 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.4□□□□□ -1.71
TO15178 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.4□□□□□ -1.71
TO15178 BX248409.1-201ENST00000455497 255 ntBASIC4.4□□□□□ -1.71
TO15178 AC091959.2-201ENST00000477363 321 ntBASIC4.4□□□□□ -1.71
TO15178 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
TO15178 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.4□□□□□ -1.71
TO15178 AC083829.1-201ENST00000503756 657 ntBASIC4.4□□□□□ -1.71
TO15178 HMGB3P13-201ENST00000511263 607 ntBASIC4.4□□□□□ -1.71
TO15178 RN7SKP283-201ENST00000517197 270 ntBASIC4.4□□□□□ -1.71
TO15178 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.4□□□□□ -1.71
TO15178 AP001880.2-201ENST00000538233 448 ntBASIC4.4□□□□□ -1.71
TO15178 FKBP1BP1-201ENST00000553366 325 ntBASIC4.4□□□□□ -1.71
TO15178 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.4□□□□□ -1.71
TO15178 AC091042.1-201ENST00000579213 173 ntBASIC4.4□□□□□ -1.71
TO15178 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TO15178 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.4□□□□□ -1.71
TO15178 RPP40P2-201ENST00000603596 712 ntBASIC4.4□□□□□ -1.71
TO15178 AC093765.1-201ENST00000603758 881 ntBASIC4.4□□□□□ -1.71
TO15178 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.4□□□□□ -1.71
TO15178 FAM25E-202ENST00000608562 189 ntBASIC4.4□□□□□ -1.71
TO15178 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 AL355816.2-201ENST00000610049 647 ntBASIC4.4□□□□□ -1.71
TO15178 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TO15178 AC009237.17-201ENST00000618111 748 ntBASIC4.4□□□□□ -1.71
TO15178 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.4□□□□□ -1.71
TO15178 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TO15178 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
TO15178 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.39□□□□□ -1.71
TO15178 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
TO15178 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 AL442639.1-201ENST00000625030 1899 ntBASIC4.39□□□□□ -1.71
TO15178 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.39□□□□□ -1.71
TO15178 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TO15178 MIR708-201ENST00000390708 88 ntBASIC4.39□□□□□ -1.71
TO15178 LAP3P1-201ENST00000403648 294 ntBASIC4.39□□□□□ -1.71
TO15178 ARL4AP5-201ENST00000404372 599 ntBASIC4.39□□□□□ -1.71
TO15178 RNU6-77P-201ENST00000410554 91 ntBASIC4.39□□□□□ -1.71
TO15178 RSU1P3-201ENST00000412878 835 ntBASIC4.39□□□□□ -1.71
TO15178 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.39□□□□□ -1.71
TO15178 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.39□□□□□ -1.71
TO15178 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
TO15178 E2F6P2-201ENST00000420708 748 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms