Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL21P13-201ENST00000488305 481 ntBASIC6.76□□□□□ -1.33
CUX2O14529 RNA5SP179-201ENST00000517284 121 ntBASIC6.76□□□□□ -1.33
CUX2O14529 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.76□□□□□ -1.33
CUX2O14529 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.76□□□□□ -1.33
CUX2O14529 RPL12P50-201ENST00000603116 116 ntBASIC6.76□□□□□ -1.33
CUX2O14529 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CUX2O14529 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CUX2O14529 AL672167.1-203ENST00000641299 2975 ntBASIC6.75□□□□□ -1.33
CUX2O14529 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 ZNF602P-201ENST00000405929 924 ntBASIC6.75□□□□□ -1.33
CUX2O14529 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.75□□□□□ -1.33
CUX2O14529 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.75□□□□□ -1.33
CUX2O14529 AC127537.2-201ENST00000439258 465 ntBASIC6.75□□□□□ -1.33
CUX2O14529 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.75□□□□□ -1.33
CUX2O14529 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.75□□□□□ -1.33
CUX2O14529 Y_RNA.673-201ENST00000516306 88 ntBASIC6.75□□□□□ -1.33
CUX2O14529 AC087369.1-201ENST00000520775 996 ntBASIC6.75□□□□□ -1.33
CUX2O14529 CYCSP28-201ENST00000534284 321 ntBASIC6.75□□□□□ -1.33
CUX2O14529 AC125494.3-201ENST00000602759 455 ntBASIC6.75□□□□□ -1.33
CUX2O14529 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 AC011503.2-201ENST00000594230 1500 ntBASIC6.75□□□□□ -1.33
CUX2O14529 BTBD10P1-201ENST00000549824 1352 ntBASIC6.75□□□□□ -1.33
CUX2O14529 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CUX2O14529 RNA5SP399-201ENST00000364003 117 ntBASIC6.74□□□□□ -1.33
CUX2O14529 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.74□□□□□ -1.33
CUX2O14529 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.74□□□□□ -1.33
CUX2O14529 CCRL1P1-201ENST00000449542 1053 ntBASIC6.74□□□□□ -1.33
CUX2O14529 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.74□□□□□ -1.33
CUX2O14529 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
CUX2O14529 RN7SKP46-201ENST00000515942 234 ntBASIC6.74□□□□□ -1.33
CUX2O14529 IGKV2-38-201ENST00000517443 247 ntBASIC6.74□□□□□ -1.33
CUX2O14529 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.74□□□□□ -1.33
CUX2O14529 OR51C1P-201ENST00000608504 942 ntBASIC6.74□□□□□ -1.33
CUX2O14529 AC019278.1-201ENST00000623516 479 ntBASIC6.74□□□□□ -1.33
CUX2O14529 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUX2O14529 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.74□□□□□ -1.33
CUX2O14529 AL513548.1-201ENST00000562904 1724 ntBASIC6.74□□□□□ -1.33
CUX2O14529 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CUX2O14529 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUX2O14529 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.74□□□□□ -1.33
CUX2O14529 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CUX2O14529 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CUX2O14529 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.73□□□□□ -1.33
CUX2O14529 UBTFL3-201ENST00000418934 1024 ntBASIC6.73□□□□□ -1.33
CUX2O14529 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.73□□□□□ -1.33
CUX2O14529 UBTFL6-201ENST00000477929 1024 ntBASIC6.73□□□□□ -1.33
CUX2O14529 AC010285.3-201ENST00000511668 676 ntBASIC6.73□□□□□ -1.33
CUX2O14529 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.73□□□□□ -1.33
CUX2O14529 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.73□□□□□ -1.33
CUX2O14529 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.73□□□□□ -1.33
CUX2O14529 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.73□□□□□ -1.33
CUX2O14529 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
CUX2O14529 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 EOGT-210ENST00000615922 1931 ntBASIC6.73□□□□□ -1.33
CUX2O14529 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CUX2O14529 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.73□□□□□ -1.33
CUX2O14529 AC017083.1-201ENST00000428093 483 ntBASIC6.73□□□□□ -1.33
CUX2O14529 UBE2V1P1-201ENST00000430836 445 ntBASIC6.73□□□□□ -1.33
CUX2O14529 RPL29P14-201ENST00000495837 428 ntBASIC6.73□□□□□ -1.33
CUX2O14529 LDHBP3-201ENST00000514909 822 ntBASIC6.73□□□□□ -1.33
CUX2O14529 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUX2O14529 TUG1_1.1-201ENST00000610654 145 ntBASIC6.73□□□□□ -1.33
CUX2O14529 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 AL672167.1-205ENST00000641112 3080 ntBASIC6.72□□□□□ -1.33
CUX2O14529 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 AC093591.2-201ENST00000565254 3843 ntBASIC6.72□□□□□ -1.33
CUX2O14529 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.72□□□□□ -1.33
CUX2O14529 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC6.72□□□□□ -1.33
CUX2O14529 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.72□□□□□ -1.33
CUX2O14529 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUX2O14529 OR56A5-201ENST00000340110 738 ntBASIC6.72□□□□□ -1.33
CUX2O14529 COTL1P1-201ENST00000422309 375 ntBASIC6.72□□□□□ -1.33
CUX2O14529 RPL32P28-201ENST00000443577 397 ntBASIC6.72□□□□□ -1.33
CUX2O14529 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.72□□□□□ -1.33
CUX2O14529 SNORD105B-201ENST00000458770 79 ntBASIC6.72□□□□□ -1.33
CUX2O14529 BTG4P1-201ENST00000510421 183 ntBASIC6.72□□□□□ -1.33
CUX2O14529 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.72□□□□□ -1.33
CUX2O14529 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CUX2O14529 AC007066.2-202ENST00000566531 914 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms