Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC188H7C350 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC188H7C350 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC188H7C350 SNORA58B-201ENST00000364259 136 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 SPTLC1P2-201ENST00000407089 121 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RNA5SP39-201ENST00000411245 120 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 COX6B1P1-201ENST00000415962 213 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AL138785.1-201ENST00000425821 331 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 DEFB130D-201ENST00000426866 237 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC188H7C350 AP001324.1-201ENST00000428553 399 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC188H7C350 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 IFNWP4-201ENST00000453148 294 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC063943.1-201ENST00000465434 453 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RPL7P16-201ENST00000479738 738 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RN7SL727P-201ENST00000482164 296 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RPL32P9-201ENST00000487963 407 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RN7SL812P-201ENST00000493791 279 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC104629.1-201ENST00000494226 508 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AL035404.1-201ENST00000497982 568 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC188H7C350 RPL7L1P13-201ENST00000511702 739 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 RNU5A-7P-201ENST00000515979 116 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 OR5AZ1P-201ENST00000527448 943 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC188H7C350 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC188H7C350 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC188H7C350 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC188H7C350 AC124283.4-201ENST00000581815 456 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 NTAN1P1-201ENST00000603150 646 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC021851.1-201ENST00000608537 1082 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC233309.1-201ENST00000619522 751 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 AC017104.5-201ENST00000637647 639 ntBASIC4.55□□□□□ -1.68
CCDC188H7C350 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC188H7C350 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC188H7C350 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AL592182.3-201ENST00000642132 3304 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 RN7SKP149-201ENST00000363008 344 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RNA5SP443-201ENST00000363083 132 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RNU6-1339P-201ENST00000363574 91 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC188H7C350 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC188H7C350 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC188H7C350 RPL23AP59-201ENST00000399415 461 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RN7SKP213-201ENST00000410746 298 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC069282.1-201ENST00000411911 526 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC073310.1-201ENST00000423226 1033 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 YWHAEP5-201ENST00000431545 765 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC006517.1-201ENST00000480485 328 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RPSAP50-201ENST00000481955 852 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC093270.2-201ENST00000486157 792 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RPS26P15-201ENST00000488067 348 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 UBA52P3-201ENST00000491303 382 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 RPS23P1-201ENST00000491662 432 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 HPRT1P2-201ENST00000505250 544 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 NAMPTP2-201ENST00000505629 1115 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 HMGN1P15-201ENST00000513870 295 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC068339.2-201ENST00000534395 618 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC139103.1-201ENST00000534696 1030 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC188H7C350 OR4U1P-201ENST00000554958 912 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC133552.5-201ENST00000604266 540 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 FRG1HP-204ENST00000617940 757 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC188H7C350 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC188H7C350 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC188H7C350 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC188H7C350 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC188H7C350 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC188H7C350 AC093535.2-201ENST00000624769 2326 ntBASIC4.54□□□□□ -1.68
CCDC188H7C350 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC188H7C350 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 DDX18P3-201ENST00000404856 2007 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC188H7C350 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC188H7C350 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC188H7C350 AL590240.1-201ENST00000334118 313 ntBASIC4.53□□□□□ -1.68
CCDC188H7C350 RNU6-543P-201ENST00000362576 108 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms