Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL445423.1-201ENST00000609941 536 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC100847.1-201ENST00000611316 481 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL121873.1-201ENST00000616013 524 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC123768.4-201ENST00000616244 701 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL049777.1-201ENST00000622740 518 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 U3.53-201ENST00000628922 216 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL451142.2-201ENST00000429076 2090 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL592148.3-201ENST00000608771 2646 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC114546.3-201ENST00000623582 1734 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 THAP12P5-201ENST00000405864 2275 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ZNF849P-201ENST00000594711 1566 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 RNU6-1339P-201ENST00000363574 91 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 RNU2-6P-201ENST00000411404 190 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC114814.2-201ENST00000419195 485 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ELOCP11-201ENST00000436690 332 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC092809.1-201ENST00000441469 474 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 RPL7P33-201ENST00000444159 742 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ELOCP16-201ENST00000444494 332 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 Z95152.1-201ENST00000453556 656 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 MTND4LP2-201ENST00000502312 285 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 IGBP1P5-201ENST00000507524 1000 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC093840.1-201ENST00000511599 336 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC010306.1-201ENST00000523223 1117 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC139103.1-201ENST00000534696 1030 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC023824.3-201ENST00000569003 562 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC008507.2-201ENST00000588402 1176 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AL356218.2-201ENST00000605264 187 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC092953.2-201ENST00000608000 699 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC023509.5-201ENST00000617434 807 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AC010872.1-201ENST00000624225 675 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AL596275.2-204ENST00000641628 552 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AL596275.2-206ENST00000641957 626 ntBASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPIPA3F8WFD2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 DHX9P1-201ENST00000436565 3076 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC119744.1-201ENST00000454746 1715 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 DNAJC19P6-201ENST00000401853 280 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL049693.1-201ENST00000402760 611 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL592291.1-201ENST00000403830 352 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL358176.3-201ENST00000420757 454 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 UBE2V1P5-201ENST00000440070 405 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 EEF1A1P1-201ENST00000447052 739 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC005002.1-201ENST00000447458 540 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC104651.2-201ENST00000447549 528 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC008280.2-201ENST00000455473 307 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC098799.3-201ENST00000506095 438 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC008562.1-201ENST00000521763 330 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 HMGB1P1-201ENST00000522557 636 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 PARP1P2-201ENST00000556806 195 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC084783.1-201ENST00000565846 910 ntBASIC4.19□□□□□ -1.74
NPIPA3F8WFD2 AC010735.1-201ENST00000567305 1026 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms