Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 XPOTP1-201ENST00000443317 2398 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AL591848.4-201ENST00000567832 3472 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 AC016583.1-201ENST00000624221 2431 ntBASIC6.54□□□□□ -1.36
PCDHGA11Q9Y5H2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL662795.2-201ENST00000624252 3706 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-1013P-201ENST00000384180 107 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-831P-201ENST00000384548 107 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR99A-201ENST00000384906 81 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SKP117-201ENST00000410175 264 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC003989.1-201ENST00000434569 565 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL022237.1-201ENST00000446663 358 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MEMO1P4-201ENST00000453590 386 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL561P-201ENST00000488553 281 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 HSPD1P15-201ENST00000505573 1122 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC091885.1-201ENST00000506658 268 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 SNORA25.17-201ENST00000517184 124 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL21P12-201ENST00000559810 515 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC126323.4-201ENST00000566935 234 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC091932.1-201ENST00000569381 427 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC006270.2-201ENST00000578523 652 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL270P-201ENST00000579643 281 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MIR4428-201ENST00000584884 73 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL23AP92-201ENST00000603609 255 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL031658.2-201ENST00000616850 651 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 AL132822.1-201ENST00000617063 513 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 7SK.10-201ENST00000621414 298 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CYP3A51P-201ENST00000633513 256 ntBASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHGA11Q9Y5H2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PCDHGA11Q9Y5H2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 AL024474.1-201ENST00000404655 591 ntBASIC6.52□□□□□ -1.37
PCDHGA11Q9Y5H2 RN7SKP235-201ENST00000410662 305 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms