Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC068768.2-201ENST00000602352 343 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC016727.2-201ENST00000603988 621 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC005962.2-201ENST00000611427 652 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC008250.2-201ENST00000615261 205 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AL512652.1-201ENST00000619006 500 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC073488.3-201ENST00000631611 778 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 AC073365.1-203ENST00000641055 1992 ntBASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
PDZRN3Q9UPQ7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AL033543.1-201ENST00000623440 13454 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 OR5J1P-201ENST00000313544 939 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RNA5SP110-201ENST00000362638 115 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RNU5E-5P-201ENST00000365379 116 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SKP292-201ENST00000365522 317 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SNORD3H-201ENST00000384486 214 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 HMGB1P10-201ENST00000395823 563 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 PEX12P1-201ENST00000400284 1048 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-985P-201ENST00000410182 104 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RPS3AP3-201ENST00000411933 242 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SDHDP6-201ENST00000414693 480 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MTCO2P27-201ENST00000420740 428 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 OR5AW1P-201ENST00000426334 1006 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RNU7-140P-201ENST00000459546 60 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SLC25A51P1-201ENST00000468432 871 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SL717P-201ENST00000478343 297 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 KLHL2P1-201ENST00000508691 521 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SMURF2P1-201ENST00000514992 481 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SCARNA18.1-201ENST00000516330 83 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RN7SKP238-201ENST00000516483 249 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 RNU6-255P-201ENST00000516957 105 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC079600.1-201ENST00000550326 297 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC007225.2-201ENST00000562529 256 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC009120.3-201ENST00000563335 499 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AP000654.2-201ENST00000605633 586 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC139792.3-201ENST00000623525 224 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 CRYM-AS1-204ENST00000637983 556 ntBASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
PDZRN3Q9UPQ7 AC005725.1-201ENST00000577346 2607 ntBASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 AC092692.1-201ENST00000623625 2595 ntBASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
PDZRN3Q9UPQ7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC090220.1-201ENST00000593078 1699 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC130360.2-201ENST00000533477 1556 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 OR52B3P-201ENST00000314715 928 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 OR11H13P-201ENST00000359695 979 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 RNA5SP273-201ENST00000362484 113 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 SNORA51.12-201ENST00000384448 134 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 DNAJC19P6-201ENST00000401853 280 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL592114.1-201ENST00000403842 483 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 XKRYP4-201ENST00000414395 483 ntBASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.89□□□□□ -1.15
PDZRN3Q9UPQ7 AL389915.1-201ENST00000422463 466 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms