Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC7.22□□□□□ -1.25
LHX6Q9UPM6 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 MAPK10-281ENST00000641170 3070 ntBASIC7.22□□□□□ -1.25
LHX6Q9UPM6 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.22□□□□□ -1.25
LHX6Q9UPM6 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LHX6Q9UPM6 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
LHX6Q9UPM6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.76-201ENST00000362931 109 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.151-201ENST00000363566 112 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.240-201ENST00000364469 95 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.383-201ENST00000383855 97 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 U3.39-201ENST00000408569 239 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RPL19P1-201ENST00000411635 428 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL512882.1-201ENST00000436086 832 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 SNORA81.1-201ENST00000458922 177 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RNU7-59P-201ENST00000459101 61 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RN7SL153P-201ENST00000486501 292 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RN7SL143P-201ENST00000496780 297 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RPL7P47-201ENST00000497299 556 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL359273.1-201ENST00000510918 627 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC092436.3-201ENST00000511788 257 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RNU2-69P-201ENST00000516061 100 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 DUX4L52-201ENST00000549363 777 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 MIR4443-201ENST00000585052 53 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC108451.2-201ENST00000603875 538 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL138889.2-201ENST00000603883 242 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 RN7SL778P-201ENST00000607160 297 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL590240.4-201ENST00000616908 390 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC073593.1-201ENST00000624500 411 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AC006484.1-201ENST00000435086 1884 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AP002364.1-201ENST00000623330 3386 ntBASIC7.21□□□□□ -1.26
LHX6Q9UPM6 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
LHX6Q9UPM6 AL080317.3-201ENST00000607434 4315 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 AC023421.1-201ENST00000590535 1785 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 AL391262.1-201ENST00000556558 1992 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 AL121950.1-201ENST00000624993 2077 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 OR7E11P-202ENST00000642027 1491 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 OR52B3P-201ENST00000314715 928 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.16-201ENST00000362421 102 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 RNU6-960P-201ENST00000364056 120 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 Y_RNA.273-201ENST00000364703 102 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LHX6Q9UPM6 MIR649-201ENST00000384843 97 ntBASIC7.2□□□□□ -1.26
LHX6Q9UPM6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms