Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC083899.1-201ENST00000454465 3819 ntBASIC5.77□□□□□ -1.49
PPARGC1AQ9UBK2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.77□□□□□ -1.49
PPARGC1AQ9UBK2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PPARGC1AQ9UBK2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PPARGC1AQ9UBK2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL353796.1-201ENST00000561542 3241 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RNU6-374P-201ENST00000364146 108 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RNU6-660P-201ENST00000364566 109 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RNU6-1283P-201ENST00000365314 105 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RNA5SP88-201ENST00000365560 109 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 SNORA70.6-201ENST00000383934 134 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 SNORD116-23-201ENST00000384645 92 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RN7SKP56-201ENST00000410513 331 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 OR8G2P-201ENST00000412796 908 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 OR6E1P-201ENST00000414424 923 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 TXNP5-201ENST00000441043 315 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 YWHAEP1-201ENST00000453697 763 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RPL23AP71-201ENST00000470966 469 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RPS27P23-201ENST00000487608 251 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RPSAP51-201ENST00000497462 645 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 SNX5P1-201ENST00000505757 1041 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RNU6-1261P-201ENST00000517194 104 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC239860.2-201ENST00000525886 270 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC087276.1-201ENST00000529659 480 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 OR8G3P-201ENST00000533406 921 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC004217.3-201ENST00000551552 878 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC087883.1-201ENST00000551882 391 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC022404.1-201ENST00000555320 273 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 ZNF519P2-201ENST00000557032 169 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MRPS21P7-201ENST00000566937 238 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MIR1273E-201ENST00000581165 102 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 VN1R84P-201ENST00000593697 235 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC010487.1-201ENST00000594408 1172 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL606834.2-201ENST00000602954 668 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 FO393422.1-201ENST00000603908 708 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC055764.2-201ENST00000610089 670 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AL691477.1-201ENST00000624398 162 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 AC019072.1-201ENST00000604535 1551 ntBASIC5.76□□□□□ -1.49
PPARGC1AQ9UBK2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AL079343.1-201ENST00000572358 1771 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 RNU6-582P-201ENST00000362989 107 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 RNA5SP435-201ENST00000364044 108 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 RN7SKP81-201ENST00000365603 331 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 MIR551A-201ENST00000385042 96 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 PEX12P1-201ENST00000400284 1048 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 RAP1BP3-201ENST00000407180 549 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AC007161.1-204ENST00000423039 460 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 ISCA1P1-201ENST00000426679 387 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AC093392.2-201ENST00000450682 337 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 VDAC2P4-201ENST00000452925 711 ntBASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PPARGC1AQ9UBK2 AC023141.9-201ENST00000458734 412 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms