Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 MIR134-201ENST00000385258 73 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 MIR3065-201ENST00000390137 79 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AL161909.1-201ENST00000397390 712 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AL022722.2-201ENST00000402519 180 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 RPL23AP38-201ENST00000423801 469 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 EIF2S2P5-201ENST00000457635 968 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 RPS7P7-201ENST00000463499 571 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 RN7SL691P-201ENST00000494487 301 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 NOP56P3-201ENST00000549457 385 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 GLRXP2-201ENST00000555594 321 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AC090181.2-201ENST00000602975 672 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 AC140479.6-201ENST00000633535 357 ntBASIC4.54□□□□□ -1.68
HPS4Q9NQG7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
HPS4Q9NQG7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AL136964.1-201ENST00000622038 2990 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC139769.1-204ENST00000472297 1931 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AL583835.1-201ENST00000399570 407 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC025750.1-201ENST00000399891 379 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 RPS27AP11-201ENST00000402798 447 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 DPY19L1P2-201ENST00000426647 915 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AL500527.1-201ENST00000448532 255 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC008958.1-201ENST00000511047 682 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 CYCSP28-201ENST00000534284 321 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 PSMA6P4-201ENST00000603247 718 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC245389.2-201ENST00000616023 576 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC242843.1-201ENST00000618702 573 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HPS4Q9NQG7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.53□□□□□ -1.68
HPS4Q9NQG7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 OR56B2P-201ENST00000317102 954 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RNA5SP502-201ENST00000362694 119 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RN7SKP280-201ENST00000364196 304 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 RPL32P23-201ENST00000397237 405 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL691517.1-201ENST00000440833 1235 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 MTCO3P43-201ENST00000440974 771 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.52□□□□□ -1.69
HPS4Q9NQG7 AL645939.1-201ENST00000453429 797 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms