Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL392088.2-201ENST00000637607 285 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 AC097634.1-201ENST00000604491 2467 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 AC007823.1-201ENST00000569932 1566 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 SNORA48.5-201ENST00000391143 135 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 SNORA3.3-201ENST00000408712 125 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 CYCSP35-201ENST00000451978 304 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 BDH2P1-201ENST00000602288 736 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 BNIP3P10-201ENST00000605360 577 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AL355365.1-201ENST00000616480 294 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 CDY11P-201ENST00000447168 1651 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC006971.1-201ENST00000407916 4486 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 USP8P1-201ENST00000494673 3183 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC006484.1-201ENST00000435086 1884 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 RNU1-33P-201ENST00000364249 162 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC005300.1-201ENST00000428401 373 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC008011.1-201ENST00000545989 227 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AL354760.1-201ENST00000608357 643 ntBASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.97□□□□□ -1.61
SHANK3Q9BYB0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
SHANK3Q9BYB0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 SNORD9-201ENST00000362566 104 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 SEPT7P8-201ENST00000413308 775 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 DEFB109D-201ENST00000529497 240 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 AC068020.1-201ENST00000594215 661 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 AC110801.1-201ENST00000623590 212 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 AP001284.1-201ENST00000528393 2118 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 AC004656.1-201ENST00000568479 4951 ntBASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHANK3Q9BYB0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 DBIP2-201ENST00000419076 262 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 SETP9-201ENST00000423837 832 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 RNA5SP103-201ENST00000459503 118 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AP000563.1-201ENST00000490865 758 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AC026979.4-201ENST00000606555 645 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AC013412.1-201ENST00000610687 192 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AL773545.4-201ENST00000637262 310 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AL513478.4-201ENST00000641636 310 ntBASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.95□□□□□ -1.62
SHANK3Q9BYB0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 RNA5SP126-201ENST00000365092 109 ntBASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 ATP5JP1-201ENST00000431631 322 ntBASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 AC073387.1-201ENST00000453261 709 ntBASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 RPS3AP14-201ENST00000483907 780 ntBASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 MIR7154-201ENST00000620673 73 ntBASIC4.94□□□□□ -1.62
SHANK3Q9BYB0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms