Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
CHMP4CQ96CF2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.9□□□□□ -1.47
CHMP4CQ96CF2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL731566.1-201ENST00000620490 1937 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AP001642.1-201ENST00000624727 2117 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC010329.2-201ENST00000595195 2737 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 MIR16-1-201ENST00000385271 89 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 SNORA40.2-201ENST00000390847 128 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 RNU2-6P-201ENST00000411404 190 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL358176.3-201ENST00000420757 454 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 MTCO1P3-201ENST00000429327 192 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 HIGD1AP4-201ENST00000430194 280 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 OR7E125P-201ENST00000443450 846 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC007327.1-201ENST00000447461 264 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 MRPL35P4-201ENST00000453682 566 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AL356981.1-201ENST00000454879 684 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 PRDX3P4-201ENST00000470828 747 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 GAPDHP39-201ENST00000481866 979 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 HMGB3P16-201ENST00000508037 287 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC092593.2-201ENST00000513866 913 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 ENPP7P9-201ENST00000514456 627 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AP000676.2-201ENST00000529711 301 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC092747.2-201ENST00000545069 983 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC090888.2-201ENST00000559765 1144 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC087283.1-201ENST00000604029 1074 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC231759.1-201ENST00000616455 597 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AP000484.1-201ENST00000620067 1252 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC000123.3-201ENST00000624029 4975 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC025263.3-201ENST00000622965 1396 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 ZNF876P-202ENST00000398732 1485 ntBASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CHMP4CQ96CF2 AC092162.3-201ENST00000624511 1624 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 ASNSP1-204ENST00000641977 1664 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC000374.1-201ENST00000434698 1745 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC022031.1-201ENST00000585985 2593 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 LRRC37BP1-201ENST00000398851 714 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 SNORA77-201ENST00000408716 125 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RNU2-50P-201ENST00000410494 143 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RNU6-575P-201ENST00000411326 105 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RPL6P29-201ENST00000414863 865 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 TMBIM7P-201ENST00000418074 855 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 RBMY2KP-201ENST00000418221 992 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC092162.1-201ENST00000432828 434 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC092013.1-201ENST00000438795 332 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AL031584.1-201ENST00000447169 754 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC010733.1-201ENST00000451515 401 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC084024.2-201ENST00000503480 791 ntBASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.88□□□□□ -1.47
CHMP4CQ96CF2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms