Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AC243972.3-201ENST00000539655 198 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AL355836.1-201ENST00000555951 870 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AC243960.4-201ENST00000600532 288 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AL158801.5-201ENST00000623123 465 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 OR5BR1P-201ENST00000524992 1330 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 DOCK11P1-201ENST00000553480 5932 ntBASIC10.23□□□□□ -0.77
TRIM41Q8WV44 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TRIM41Q8WV44 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 OLMALINC-203ENST00000641087 3779 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC126755.2-208ENST00000327792 462 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC138969.1-213ENST00000331436 462 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RNU6-1339P-201ENST00000363574 91 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RNY4P34-201ENST00000364779 95 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RPL23AP29-201ENST00000397284 453 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC092745.2-202ENST00000411880 369 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC007562.1-201ENST00000421819 517 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 BRK1P2-201ENST00000442875 223 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC023274.2-201ENST00000445264 521 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RPL39P36-201ENST00000490784 156 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC100784.1-201ENST00000522790 310 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 RGS5-218ENST00000526176 574 ntTSL 4 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC009977.1-201ENST00000586015 570 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC006504.6-201ENST00000590142 199 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 VN1R80P-201ENST00000597126 338 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AL122125.1-201ENST00000616999 600 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 MIR1302-1-201ENST00000637932 143 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 AC138915.3-201ENST00000562908 1389 ntBASIC10.22□□□□□ -0.77
TRIM41Q8WV44 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC10.22□□□□□ -0.77
TRIM41Q8WV44 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC022034.1-201ENST00000512867 2156 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 SNORD8-201ENST00000363915 110 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 U8.14-201ENST00000390843 143 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 RNU6-244P-201ENST00000391028 104 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL109941.1-201ENST00000401925 229 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 RPS24P12-201ENST00000402084 394 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 PDCL2P1-201ENST00000419302 352 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 SKP1P3-201ENST00000429280 487 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 FTH1P16-201ENST00000435241 552 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 RPS20P20-201ENST00000460498 340 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC023818.1-201ENST00000498379 384 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 BTG4P1-201ENST00000510421 183 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 WBP1LP3-201ENST00000523033 208 ntBASIC10.21□□□□□ -0.77
TRIM41Q8WV44 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 CASP1-216ENST00000534497 825 ntTSL 5 BASIC10.21□□□□□ -0.77
TRIM41Q8WV44 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms