Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 HIF1AP1-201ENST00000553642 175 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 OR4H6P-201ENST00000563771 921 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MTCYBP13-201ENST00000578634 1093 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MIR3176-201ENST00000582210 90 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC093788.1-201ENST00000609356 927 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MIR6826-201ENST00000617808 98 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AP004607.9-201ENST00000618202 316 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AL603758.1-201ENST00000618654 241 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC021106.3-201ENST00000623925 531 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC024023.1-201ENST00000624530 922 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AL359955.1-201ENST00000455242 3275 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC007823.1-201ENST00000569932 1566 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 AC011447.7-201ENST00000624228 1590 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 MTND5P16-201ENST00000460269 1703 ntBASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.21□□□□□ -1.42
SHKBP1Q8TBC3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC007998.4-201ENST00000612496 2533 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 Y_RNA.1-201ENST00000352915 104 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-1103P-201ENST00000384150 107 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SNRPEP10-201ENST00000420249 274 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RPL34P3-201ENST00000421454 338 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC093084.1-201ENST00000424233 687 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 CYCSP11-201ENST00000436426 315 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 BRK1P2-201ENST00000442875 223 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 FABP3P2-201ENST00000453169 399 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL513533.1-201ENST00000453728 415 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 FGF7P3-201ENST00000454645 303 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL590639.1-201ENST00000456484 337 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RPS20P20-201ENST00000460498 340 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC110749.1-201ENST00000462007 357 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 HMGN2P25-201ENST00000486956 268 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 MTND6P2-201ENST00000512226 524 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RN7SKP67-201ENST00000515905 235 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-1281P-201ENST00000516223 105 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-277P-201ENST00000516272 106 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 IGLV3-30-201ENST00000524362 298 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC011611.1-201ENST00000552179 197 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC091078.2-201ENST00000557145 559 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 GTF2IP8-201ENST00000560687 584 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 KPNA2P3-201ENST00000584190 848 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 RPL12P25-202ENST00000598100 674 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL136363.1-201ENST00000605349 337 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC124303.1-201ENST00000605703 360 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC105429.2-201ENST00000610567 517 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 uc_338.26-201ENST00000612659 160 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AL442067.1-201ENST00000613261 223 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 MIR1302-1-201ENST00000637932 143 ntBASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SHKBP1Q8TBC3 AC022164.1-201ENST00000568767 2673 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms