Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU1-44P-201ENST00000384453 163 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 NDUFA5P2-201ENST00000519723 344 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC233702.9-201ENST00000581528 203 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC112230.1-201ENST00000604342 547 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 DDX18P5-201ENST00000534547 1306 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AL133268.1-201ENST00000405676 1401 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 HSPD1P21-201ENST00000436541 245 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AL645931.1-201ENST00000439737 410 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 RN7SL132P-201ENST00000478131 296 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 RN7SL812P-201ENST00000493791 279 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC108145.1-201ENST00000503770 153 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC016590.3-201ENST00000611171 753 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 SNORA73.2-201ENST00000364946 201 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 RPL21P17-201ENST00000397467 475 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AL035423.1-201ENST00000420331 213 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC233982.1-201ENST00000451247 436 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC138832.1-201ENST00000522871 556 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC079880.2-201ENST00000603790 1213 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 COX6CP4-201ENST00000605798 228 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AL451049.1-201ENST00000608672 497 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 MTCO1P22-201ENST00000604619 1360 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AC093909.5-201ENST00000621839 1799 ntBASIC1.23□□□□□ -2.21
SYNE1Q8NF91 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC1.23□□□□□ -2.21
SYNE1Q8NF91 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RNA5SP39-201ENST00000411245 120 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RPS17P13-201ENST00000448974 407 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC091564.1-201ENST00000464563 479 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC018635.1-201ENST00000468292 1030 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC110768.1-201ENST00000509222 400 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 SNORD66.1-201ENST00000391230 76 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RPL7P49-201ENST00000471402 708 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC091905.2-201ENST00000623143 306 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC138907.10-201ENST00000623708 983 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MTCO1P7-201ENST00000419523 1542 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 MIR1179-201ENST00000408703 91 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RPL36AP10-201ENST00000421785 322 ntBASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE1Q8NF91 RANP9-201ENST00000519957 271 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms