Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 Z74696.2-201ENST00000436514 498 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 RPS6P2-201ENST00000454208 705 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AL133162.1-201ENST00000463228 453 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 NPM1P47-201ENST00000560843 856 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.84□□□□□ -1.63
RTL9Q8NET4 AL049634.3-201ENST00000604968 457 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC005972.3-201ENST00000606304 481 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AL008729.2-201ENST00000606393 473 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC096577.2-201ENST00000611455 153 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AC019176.2-201ENST00000611579 315 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 AL391261.4-201ENST00000616012 481 ntBASIC4.84□□□□□ -1.63
RTL9Q8NET4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTL9Q8NET4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTL9Q8NET4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RTL9Q8NET4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RTL9Q8NET4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RTL9Q8NET4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 RNU6-525P-201ENST00000363685 104 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 SNORA3.3-201ENST00000408712 125 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 RPL7AP73-201ENST00000413490 353 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC008280.1-201ENST00000418851 412 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 HMGN2P31-201ENST00000432430 273 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 RPL21P11-201ENST00000461458 483 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC017037.1-201ENST00000508460 471 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 IGKV2-38-201ENST00000517443 247 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC026368.1-201ENST00000614934 690 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC015967.1-201ENST00000619893 476 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AC074140.1-201ENST00000621617 208 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTL9Q8NET4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RTL9Q8NET4 NEAT1-202ENST00000501122 22743 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 AP004289.2-201ENST00000444413 1457 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 HSPD1P11-201ENST00000508643 1702 ntBASIC4.83□□□□□ -1.64
RTL9Q8NET4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC233289.1-201ENST00000403700 508 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC091390.3-201ENST00000426478 338 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AL591419.1-201ENST00000427423 339 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 HMGB1P37-201ENST00000439613 609 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 CDH12P2-201ENST00000504393 298 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC025554.1-201ENST00000505641 188 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 DUXAP2-201ENST00000519198 589 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC233280.2-201ENST00000603917 1070 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 AL353600.1-201ENST00000608148 251 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RTL9Q8NET4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL9Q8NET4 AC011266.1-201ENST00000624119 3569 ntBASIC4.82□□□□□ -1.64
RTL9Q8NET4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL9Q8NET4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 MIR183-201ENST00000384958 110 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 SNORA11C-201ENST00000408532 129 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 TCEA1P2-201ENST00000420496 906 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL9Q8NET4 PDSS1P2-201ENST00000449397 678 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
RTL9Q8NET4 RPL7P24-201ENST00000493052 752 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms