Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RNA5SP234-201ENST00000363916 119 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RN7SKP124-201ENST00000364730 341 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RPL23AP47-201ENST00000408017 460 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 SNORA11.5-201ENST00000408163 128 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RNU6-757P-201ENST00000410334 100 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RN7SKP125-201ENST00000410481 302 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC006960.1-201ENST00000419980 153 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL139421.1-201ENST00000423010 169 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC233981.1-201ENST00000423224 461 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RPL12P34-201ENST00000424532 479 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 SKP1P3-201ENST00000429280 487 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MTND5P25-201ENST00000430499 799 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL390119.1-201ENST00000440329 312 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RPL36AP39-201ENST00000445859 318 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL034418.1-201ENST00000448675 860 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL133445.1-201ENST00000467051 452 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC100832.1-201ENST00000471945 383 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 ACTG1P13-201ENST00000486987 1043 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC010486.2-201ENST00000505572 483 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC113430.1-201ENST00000506872 718 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC021146.8-201ENST00000507455 733 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RNU6-488P-201ENST00000515918 99 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC024940.3-201ENST00000538551 316 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AGGF1P6-201ENST00000569213 976 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 BNIP3P24-201ENST00000593398 557 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL390838.2-201ENST00000602394 274 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC097065.2-201ENST00000608159 533 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC131235.4-201ENST00000609288 620 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AL360219.1-201ENST00000610230 366 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC118658.2-201ENST00000618697 459 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MIR8080-201ENST00000622224 89 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MIR1910-201ENST00000636955 80 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 MKKS-204ENST00000639674 192 ntBASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
DNAAF1Q8NEP3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 DDX18P3-201ENST00000404856 2007 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 FAM3C2-201ENST00000312214 681 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 OR5H2-201ENST00000355273 945 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 RNA5SP391-201ENST00000363456 119 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 RNU6-115P-201ENST00000364310 107 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 MTCO3P31-201ENST00000405526 789 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 MIR1282-201ENST00000408865 101 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 RN7SKP293-201ENST00000411389 296 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 RAP1BP1-201ENST00000412709 553 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AP000534.2-201ENST00000412729 568 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AC092634.6-201ENST00000418558 192 ntBASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.48□□□□□ -1.69
DNAAF1Q8NEP3 AL358176.3-201ENST00000420757 454 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms