Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC016687.1-201ENST00000482574 353 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC093824.1-201ENST00000508796 343 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC135001.1-201ENST00000544546 283 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC009101.1-201ENST00000568135 242 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC114878.2-201ENST00000604863 1251 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC005962.2-201ENST00000611427 652 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AL645927.2-201ENST00000618350 349 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AL121890.3-201ENST00000618494 516 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.42□□□□□ -1.7
CCDC112Q8NEF3 CR381670.1-201ENST00000624291 1693 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 RNU1-87P-201ENST00000363727 170 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AC009302.1-201ENST00000417147 390 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AL732292.1-201ENST00000426692 226 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 RN7SL810P-201ENST00000493031 276 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AC105233.3-201ENST00000531125 744 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AL121839.1-201ENST00000556233 1185 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 AL591424.2-201ENST00000617023 128 ntBASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC112Q8NEF3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC112Q8NEF3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC112Q8NEF3 CYP1D1P-201ENST00000416662 1433 ntBASIC4.4□□□□□ -1.7
CCDC112Q8NEF3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC112Q8NEF3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 SNORD35B-201ENST00000363660 87 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 OR6C69P-201ENST00000394268 893 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 NCSTNP1-201ENST00000406229 144 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 RPS6P12-201ENST00000432491 726 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 FTH1P16-201ENST00000435241 552 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 RPS20P4-201ENST00000461659 355 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 RN7SL303P-201ENST00000469773 251 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC010618.1-201ENST00000469924 477 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 RNA5SP519-201ENST00000516480 119 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC091515.1-201ENST00000548110 679 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC090515.3-201ENST00000560431 315 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC022655.2-201ENST00000577280 318 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 MIR4644-201ENST00000579929 84 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 KPNA2P3-201ENST00000584190 848 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC244505.7-201ENST00000599675 272 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC010809.3-201ENST00000621310 641 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC008725.1-201ENST00000605123 2263 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 AC090017.1-201ENST00000548612 1779 ntBASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC112Q8NEF3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC112Q8NEF3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms