Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC117522.1-201ENST00000509821 380 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC022483.1-201ENST00000514020 567 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 IGKV2-19-201ENST00000518132 283 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC022861.1-201ENST00000522981 663 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 MIR4505-201ENST00000582238 73 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC020916.2-201ENST00000591242 360 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC078795.3-201ENST00000602913 472 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC005034.5-201ENST00000604219 466 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AP000860.1-201ENST00000605250 559 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC007014.2-201ENST00000615581 479 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 AC138649.3-201ENST00000622154 254 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 OR5H6-203ENST00000642105 978 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NPAS4Q8IUM7 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.46□□□□□ -1.37
NPAS4Q8IUM7 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.46□□□□□ -1.37
NPAS4Q8IUM7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS4Q8IUM7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.46□□□□□ -1.37
NPAS4Q8IUM7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 RNU6-297P-201ENST00000384636 107 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 Y_RNA.554-201ENST00000384672 102 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 HMGB1P20-201ENST00000402555 677 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 MIR1178-201ENST00000408396 91 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC069218.2-201ENST00000411665 344 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 MTATP6P27-201ENST00000416987 621 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC007742.1-201ENST00000425789 329 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 RPS3AP54-201ENST00000435535 734 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AL445928.1-201ENST00000435545 222 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 ELOCP26-201ENST00000436067 329 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AL022238.1-201ENST00000442557 355 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 GDI2P2-201ENST00000445131 608 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 EIF3LP3-201ENST00000495197 822 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC104383.1-201ENST00000530297 370 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC127024.5-201ENST00000580085 462 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC110743.1-201ENST00000584870 478 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC119403.2-201ENST00000590960 598 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 OR7E18P-201ENST00000592589 702 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 FO393422.1-201ENST00000603908 708 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC005191.1-201ENST00000603950 358 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AP001005.3-201ENST00000622049 129 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 AC010329.1-201ENST00000593903 8328 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 RPS4XP5-202ENST00000449995 1334 ntBASIC6.46□□□□□ -1.38
NPAS4Q8IUM7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 CASC19-221ENST00000641309 1382 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 AC092692.1-201ENST00000623625 2595 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 Y_RNA.61-201ENST00000362835 102 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 RNA5SP394-201ENST00000364216 119 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 RNU6-1293P-201ENST00000384077 107 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 RPS3AP3-201ENST00000411933 242 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 BMS1P17-202ENST00000416720 316 ntBASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.45□□□□□ -1.38
NPAS4Q8IUM7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms