Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CDR1-202ENST00000625883 1485 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC024651.2-201ENST00000562480 2098 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC005225.5-201ENST00000623547 2225 ntBASIC5.62□□□□□ -1.51
ATG4DQ86TL0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG4DQ86TL0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RNU6-1339P-201ENST00000363574 91 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 Y_RNA.231-201ENST00000364358 102 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL451142.1-201ENST00000375867 775 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RNU6-244P-201ENST00000391028 104 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC068050.1-201ENST00000394891 380 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RNU6-373P-201ENST00000411247 98 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL035422.1-201ENST00000414193 397 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 MTND4LP17-201ENST00000414607 293 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC009161.1-201ENST00000417306 376 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC133104.1-201ENST00000429100 218 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL513175.1-201ENST00000431492 780 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 HMGB1P18-201ENST00000438801 619 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL353093.1-201ENST00000441292 436 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 DDX18P6-201ENST00000450119 1997 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC099563.1-201ENST00000456086 418 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC010307.1-201ENST00000467206 836 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 SLC25A51P1-201ENST00000468432 871 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL355032.1-201ENST00000472981 438 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC008945.1-201ENST00000505144 499 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OR7E99P-201ENST00000505750 922 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC104136.1-201ENST00000512969 394 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 HSD3BP3-201ENST00000514706 994 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RNU6-835P-201ENST00000516974 104 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AP001189.2-201ENST00000527320 189 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OR5B19P-201ENST00000531766 928 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC055876.1-202ENST00000567053 138 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 MIR4502-201ENST00000580432 81 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 MIR4271-201ENST00000582451 67 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 XIAPP1-201ENST00000603162 600 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC112187.2-201ENST00000604345 283 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 NUTF2P8-201ENST00000604593 363 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 CTHRC1P1-201ENST00000605383 469 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RN7SL261P-201ENST00000613441 282 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 HMGB1P24-202ENST00000615653 685 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AC138649.5-201ENST00000637456 137 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG4DQ86TL0 AKAP17BP-201ENST00000431706 2719 ntBASIC5.61□□□□□ -1.51
ATG4DQ86TL0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG4DQ86TL0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms