Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 IL6STP1-201ENST00000346911 1020 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RNU6-932P-201ENST00000391108 106 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 GSTA8P-201ENST00000404253 637 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 DPPA2P3-201ENST00000411853 655 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RPS29P10-201ENST00000439197 166 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RPS26P2-201ENST00000440331 348 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 ARL4AP3-201ENST00000441452 574 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CEACAMP9-201ENST00000442990 513 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 TRY2P-201ENST00000448860 689 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RPS26P41-201ENST00000450370 284 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RPS17P11-201ENST00000474297 293 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RPL7AP6-201ENST00000477943 801 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC004453.1-201ENST00000487895 408 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC005412.2-201ENST00000492004 341 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC109471.1-201ENST00000511631 612 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC119751.1-201ENST00000513357 765 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC012400.1-201ENST00000518452 381 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 OR5D15P-201ENST00000531671 942 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RBM22P1-201ENST00000578589 1214 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 MIR4646-201ENST00000580775 63 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC104687.2-201ENST00000604442 342 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC016542.1-201ENST00000608259 493 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC116651.1-201ENST00000609724 556 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 VN1R74P-201ENST00000613259 503 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 U73479.1-201ENST00000618062 168 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AC090527.3-201ENST00000619041 548 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AP002799.1-201ENST00000623552 423 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL121594.5-201ENST00000631724 573 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL672167.1-203ENST00000641299 2975 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 CASC19-206ENST00000641028 1430 ntBASIC4.28□□□□□ -1.72
C11orf88Q6PI97 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.28□□□□□ -1.72
C11orf88Q6PI97 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC008725.1-201ENST00000605123 2263 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RNA5SP455-201ENST00000365190 119 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RNU6-468P-201ENST00000384003 109 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RNU1-149P-201ENST00000390870 161 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 SSXP10-201ENST00000402595 565 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 SFR1P1-201ENST00000403720 688 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AL592291.1-201ENST00000403830 352 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MIR1250-201ENST00000408098 113 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MTND4P22-201ENST00000413116 1169 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RPP40P1-201ENST00000426762 456 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 OR2B7P-201ENST00000429302 934 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MRPL50P1-201ENST00000431951 384 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms