Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC025750.2-201ENST00000442609 450 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 SNORD105B-201ENST00000458770 79 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 IGKV2-38-201ENST00000517443 247 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC006539.2-201ENST00000601729 572 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AP004289.2-201ENST00000444413 1457 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 XGY1-201ENST00000381172 446 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 U3.23-201ENST00000391132 200 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 GSTA8P-201ENST00000404253 637 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 DYNLL1P7-201ENST00000429273 258 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 PRELID3BP10-201ENST00000431957 584 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC125494.3-201ENST00000602759 455 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AL451044.1-201ENST00000604867 238 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 HSPA8P17-201ENST00000427029 1382 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC139426.3-201ENST00000605648 2059 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RN7SL809P-201ENST00000482040 297 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC069240.1-201ENST00000548774 375 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 CR392039.4-201ENST00000624968 501 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 KATNBL1P2-201ENST00000433311 835 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RPL12P18-201ENST00000437175 325 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 SLC25A36P1-201ENST00000590111 465 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC244258.1-201ENST00000637553 1071 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 TCP1P3-201ENST00000414406 1498 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 SNORD9-201ENST00000362566 104 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RPL7P44-201ENST00000424827 742 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RPL7P23-201ENST00000493874 747 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 RNU6-579P-201ENST00000516879 102 ntBASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS13DQ5THJ4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AC009229.4-201ENST00000623854 1947 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 RNU1-70P-201ENST00000362618 164 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 EIF4EP1-201ENST00000422311 642 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 AL591419.1-201ENST00000427423 339 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 PHBP14-201ENST00000512887 367 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 RNA5SP164-201ENST00000516533 110 ntBASIC2.48□□□□□ -2.01
VPS13DQ5THJ4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms